Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00505
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47924-16|AAB51329.1|  126|Homo sapiens C10 protein.                   55   3e-07
BC009925-1|AAH09925.1|  126|Homo sapiens chromosome 12 open read...    55   3e-07

>U47924-16|AAB51329.1|  126|Homo sapiens C10 protein.
          Length = 126

 Score = 54.8 bits (126), Expect = 3e-07
 Identities = 23/59 (38%), Positives = 40/59 (67%)
 Frame = +2

Query: 74  SSPQSVSVDQMRQILNEIIDALESPDYASKLDEAKEAAGNEMLKMMQIVFPMVVQIEME 250
           + P ++S +Q + +L E+I A  +P+ A ++DEA++ A N+M KM+Q V P+  QI+ E
Sbjct: 6   TQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQE 64



 Score = 40.7 bits (91), Expect = 0.005
 Identities = 15/46 (32%), Positives = 33/46 (71%)
 Frame = +1

Query: 256 KHHGFNNSREGIVQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSI 393
           K +GF+   EG+++F +L++  E+ D E+A L  ++++ +LPP+++
Sbjct: 67  KAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTL 112


>BC009925-1|AAH09925.1|  126|Homo sapiens chromosome 12 open reading
           frame 57 protein.
          Length = 126

 Score = 54.8 bits (126), Expect = 3e-07
 Identities = 23/59 (38%), Positives = 40/59 (67%)
 Frame = +2

Query: 74  SSPQSVSVDQMRQILNEIIDALESPDYASKLDEAKEAAGNEMLKMMQIVFPMVVQIEME 250
           + P ++S +Q + +L E+I A  +P+ A ++DEA++ A N+M KM+Q V P+  QI+ E
Sbjct: 6   TQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQE 64



 Score = 40.7 bits (91), Expect = 0.005
 Identities = 15/46 (32%), Positives = 33/46 (71%)
 Frame = +1

Query: 256 KHHGFNNSREGIVQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSI 393
           K +GF+   EG+++F +L++  E+ D E+A L  ++++ +LPP+++
Sbjct: 67  KAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTL 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,572,348
Number of Sequences: 237096
Number of extensions: 2006123
Number of successful extensions: 3987
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3986
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)