Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00500
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    78   6e-17
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.48 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.9  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 78.2 bits (184), Expect = 6e-17
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +1

Query: 253 QVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 372
           +VETGVLKPG +VVFAPANITTEVKSVEMHHEAL EAVPG
Sbjct: 17  RVETGVLKPGMVVVFAPANITTEVKSVEMHHEALPEAVPG 56



 Score = 39.1 bits (87), Expect = 4e-05
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = +2

Query: 206 LQDVYKIGGIGTVPVGKLK 262
           LQDVYKIGGIGTVPVG+++
Sbjct: 1   LQDVYKIGGIGTVPVGRVE 19


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 291 NNGTWFQHTSFNLPTGTVPIP 229
           NN    QH +FNLP G +P+P
Sbjct: 229 NNPKNKQH-NFNLPPGAIPVP 248


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 360 FLESFVVHLHRFDFSSDVG 304
           FLE  + H  RF FSS VG
Sbjct: 68  FLEMTLAHHCRFKFSSSVG 86


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 157 IESFNEAFSVSFAFFTLH 104
           I++FN+ F  SF  FTL+
Sbjct: 271 IDAFNDIFGWSFLLFTLY 288


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 157 IESFNEAFSVSFAFFTLH 104
           I++FN+ F  SF  FTL+
Sbjct: 197 IDAFNDIFGWSFLLFTLY 214


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 318 SSDVGGGKDNNGTWFQHTSF 259
           ++ V GG +NNGT   H+ F
Sbjct: 182 AAQVSGGNNNNGTPGGHSGF 201


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 250 RQVETGVLKPGTIVVFAPANITTEVKS 330
           R  ETG ++PG I    P   T EV++
Sbjct: 93  RYQETGSIRPGVIGGSKPRVATPEVEN 119


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 338 ISTDLTSVVMLAGAKTTMVPGFNTPVSTCRRARYQY 231
           +S  L  +V+  G    + PGF    +TC    Y Y
Sbjct: 1   MSFKLLRLVLKVGHFFAITPGFRKNRTTCPEKIYAY 36


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 338 ISTDLTSVVMLAGAKTTMVPGFNTPVSTCRRARYQY 231
           +S  L  +V+  G    + PGF    +TC    Y Y
Sbjct: 1   MSFKLLRLVLKVGHFFAITPGFRKNRTTCPEKIYAY 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,625
Number of Sequences: 336
Number of extensions: 4321
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)