Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00500
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 142 2e-34
03_01_0547 + 4093196-4093657,4094267-4095148 142 2e-34
03_01_0544 + 4082528-4082989,4083585-4084466 142 2e-34
03_01_0543 + 4076981-4077442,4078145-4079026 142 2e-34
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 54 2e-07
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 44 1e-04
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 42 4e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 37 0.014
02_04_0462 + 23131433-23132836 37 0.019
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 36 0.044
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 36 0.044
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55... 31 0.71
02_05_0801 + 31824548-31825064,31825231-31826171 31 0.94
01_05_0589 + 23459847-23460344,23460493-23461296 31 1.2
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 3.8
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 29 3.8
01_06_0017 + 25592255-25593730 29 3.8
01_05_0587 + 23452275-23453759 29 3.8
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 5.0
01_06_0018 + 25609571-25611061 29 5.0
04_04_0511 - 25800371-25800454,25800563-25800629,25800903-258010... 28 6.6
04_01_0282 - 3764110-3764666,3765117-3765180 28 6.6
11_01_0246 + 1887680-1887838,1887942-1888064,1888177-1888263,188... 28 8.8
06_03_1165 - 28106604-28106915 28 8.8
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 28 8.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 142 bits (345), Expect = 2e-34
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 432
+VETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYV
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
Query: 433 AGDSKNNPPKGAADFTAQVIVLNHP 507
A +SK++P K AA FT+QVI++NHP
Sbjct: 314 ASNSKDDPAKEAASFTSQVIIMNHP 338
Score = 94.3 bits (224), Expect = 9e-20
Identities = 48/87 (55%), Positives = 59/87 (67%)
Frame = +2
Query: 2 GTSPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARP 181
G +P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP
Sbjct: 182 GYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRP 229
Query: 182 TXKXLRLPLQDVYKIGGIGTVPVGKLK 262
+ K LRLPLQDVYKIGGIGTVPVG+++
Sbjct: 230 SDKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 92.3 bits (219), Expect = 4e-19
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +3
Query: 510 QISNGYTPVLDCXTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 689
QI NGY PVLDC T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 690 VESFQNSHP 716
VE+F P
Sbjct: 400 VETFSEYPP 408
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 142 bits (345), Expect = 2e-34
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 432
+VETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYV
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
Query: 433 AGDSKNNPPKGAADFTAQVIVLNHP 507
A +SK++P K AA FT+QVI++NHP
Sbjct: 314 ASNSKDDPAKEAASFTSQVIIMNHP 338
Score = 94.3 bits (224), Expect = 9e-20
Identities = 48/87 (55%), Positives = 59/87 (67%)
Frame = +2
Query: 2 GTSPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARP 181
G +P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP
Sbjct: 182 GYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRP 229
Query: 182 TXKXLRLPLQDVYKIGGIGTVPVGKLK 262
+ K LRLPLQDVYKIGGIGTVPVG+++
Sbjct: 230 SDKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 92.3 bits (219), Expect = 4e-19
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +3
Query: 510 QISNGYTPVLDCXTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 689
QI NGY PVLDC T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 690 VESFQNSHP 716
VE+F P
Sbjct: 400 VETFSEYPP 408
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 142 bits (345), Expect = 2e-34
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 432
+VETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYV
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
Query: 433 AGDSKNNPPKGAADFTAQVIVLNHP 507
A +SK++P K AA FT+QVI++NHP
Sbjct: 314 ASNSKDDPAKEAASFTSQVIIMNHP 338
Score = 94.3 bits (224), Expect = 9e-20
Identities = 48/87 (55%), Positives = 59/87 (67%)
Frame = +2
Query: 2 GTSPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARP 181
G +P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP
Sbjct: 182 GYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRP 229
Query: 182 TXKXLRLPLQDVYKIGGIGTVPVGKLK 262
+ K LRLPLQDVYKIGGIGTVPVG+++
Sbjct: 230 SDKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 92.3 bits (219), Expect = 4e-19
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +3
Query: 510 QISNGYTPVLDCXTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 689
QI NGY PVLDC T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 690 VESFQNSHP 716
VE+F P
Sbjct: 400 VETFSEYPP 408
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 142 bits (345), Expect = 2e-34
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 432
+VETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYV
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
Query: 433 AGDSKNNPPKGAADFTAQVIVLNHP 507
A +SK++P K AA FT+QVI++NHP
Sbjct: 314 ASNSKDDPAKEAASFTSQVIIMNHP 338
Score = 94.3 bits (224), Expect = 9e-20
Identities = 48/87 (55%), Positives = 59/87 (67%)
Frame = +2
Query: 2 GTSPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARP 181
G +P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP
Sbjct: 182 GYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRP 229
Query: 182 TXKXLRLPLQDVYKIGGIGTVPVGKLK 262
+ K LRLPLQDVYKIGGIGTVPVG+++
Sbjct: 230 SDKPLRLPLQDVYKIGGIGTVPVGRVE 256
Score = 92.3 bits (219), Expect = 4e-19
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +3
Query: 510 QISNGYTPVLDCXTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 689
QI NGY PVLDC T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399
Query: 690 VESFQNSHP 716
VE+F P
Sbjct: 400 VETFSEYPP 408
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +2
Query: 2 GTSPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARP 181
G +AVA+VPIS +N++ ++ W DG CL++A+D + PP+R
Sbjct: 409 GYKDSAVAWVPISAMENENLMTTASDTR-LSSWY--------DGNCLLKAIDTLPPPSRD 459
Query: 182 TXKXLRLPLQDVYKIGGIGTVPVG 253
K LRLP+ DV+ +G V +G
Sbjct: 460 VSKPLRLPICDVFSSHKLGQVAIG 483
Score = 34.7 bits (76), Expect = 0.077
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +3
Query: 558 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQN 707
++ +I ++++TGK+++ P+ + S A++ + K +CVE F N
Sbjct: 577 VSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSN 626
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 253 QVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 432
++E+G + G ++ P +V SV + ++ A PG+NV + + ++ G+V
Sbjct: 201 KIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFV 260
Query: 433 AGDSKNNPPKGAADFTAQVIVL 498
K NP ++F AQ+ +L
Sbjct: 261 LSSIK-NPVSAISEFRAQLQIL 281
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/81 (37%), Positives = 38/81 (46%)
Frame = +2
Query: 20 VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTXKXLR 199
V F+PISG G NM K W G CL E LD I P R +R
Sbjct: 135 VHFLPISGLLGTNMKTRMDKSNC--SWW--------SGPCLFEVLDCIQVPLRDPKGPVR 184
Query: 200 LPLQDVYKIGGIGTVPVGKLK 262
+P+ D YK +GTV +GK++
Sbjct: 185 MPIIDKYK--DMGTVVMGKIE 203
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/81 (38%), Positives = 39/81 (48%)
Frame = +2
Query: 20 VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTXKXLR 199
V F+PISG G NM K W DG CL E LD I P R +R
Sbjct: 180 VHFLPISGLLGSNMKTRMDKS--ICSWW--------DGPCLFEVLDCIEVPLRDPKGPVR 229
Query: 200 LPLQDVYKIGGIGTVPVGKLK 262
+P+ D YK +GTV +GK++
Sbjct: 230 MPIIDKYK--DMGTVVMGKIE 248
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/82 (21%), Positives = 40/82 (48%)
Frame = +1
Query: 253 QVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 432
++E+G ++ G ++ P +V + + ++ A P +NV + + +++ G+V
Sbjct: 246 KIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFV 305
Query: 433 AGDSKNNPPKGAADFTAQVIVL 498
S NP +F AQ+ +L
Sbjct: 306 L-SSIGNPVGAVTEFNAQLQIL 326
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Frame = +2
Query: 68 PSTKMPWFKGWQVERKEGKAD--GKC----LIEALDAILP-PARPTXKXLRLPLQDVYKI 226
P ++P +G + +G D GK L++A+D +P P R K +P++DV+ I
Sbjct: 219 PGDEIPIIRGSALSALQGTNDEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSI 278
Query: 227 GGIGTVPVGKLK 262
G GTV G+++
Sbjct: 279 QGRGTVVTGRVE 290
Score = 35.9 bits (79), Expect = 0.033
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +1
Query: 253 QVETGVLKPGT---IVVFAPAN-ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELR 420
+VE G +K G I+ P+ + T V VEM + L GDNVG ++ + +++
Sbjct: 288 RVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQ 347
Query: 421 RGYVAGDSKNNPPKGAADFTAQVIVL 498
RG V K K F A++ VL
Sbjct: 348 RGQVV--CKPGTVKTYQKFEAEIYVL 371
>02_04_0462 + 23131433-23132836
Length = 467
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 244 ARRQVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 417
A ++E G +K G V T V VEM + + +A+ GDNVG ++ + ++
Sbjct: 296 ATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDI 355
Query: 418 RRGYVAGDSKNNPPKGAADFTAQVI 492
RG V + P D V+
Sbjct: 356 ERGMVLAKPASITPHTKFDAVVYVL 380
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 140 LIEALDAILP-PARPTXKXLRLPLQDVYKIGGIGTVPVGKLK 262
LI+++D +P P R T L ++DV+ I G GTV G+++
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIE 301
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 238 YRARRQVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 417
+ A ++ETG ++ G+ V+ +P VKS+E + A GDNV +++ + +L
Sbjct: 496 FAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL 555
Query: 418 RRG 426
G
Sbjct: 556 ILG 558
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 131 GKCLIEALDAILPPARPTXKXLRLPLQDVYKIGGIGT-VPVGKLK 262
G CL++A+D++ P+R K L LP+ DV K G GKL+
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLE 503
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 238 YRARRQVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 417
+ A ++ETG ++ G+ V+ +P VKS+E + A GDNV +++ + +L
Sbjct: 496 FAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL 555
Query: 418 RRG 426
G
Sbjct: 556 ILG 558
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 131 GKCLIEALDAILPPARPTXKXLRLPLQDVYKIGGIGT-VPVGKLK 262
G CL++A+D++ P+R K L LP+ DV K G GKL+
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLE 503
>08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-556139,
556223-556271,556432-556494,556602-556695,556822-556924,
557719-557791,557872-557984,558068-558149,558386-558913,
559015-559098,560156-560305,561021-561191,561759-561809,
562601-562738,562823-562894,563236-563391,563681-563839,
564080-564180,564577-564829
Length = 939
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +1
Query: 235 WYRARRQVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 414
++R +++ GV + + + + KS+++ A ++ ++ +V + + KE
Sbjct: 764 YHRGGKRIHVGVQEFTEDIAARSQAVARQFKSLKVKAVAALLSLSRNDTDEDVDSNNEKE 823
Query: 415 LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPVKSQTVTH-QYW 540
GY+ + P G D Q HP S +H YW
Sbjct: 824 KSYGYMMMERLTGSPDGRIDHVLQEKTFQHPYLSALGSHTNYW 866
>02_05_0801 + 31824548-31825064,31825231-31826171
Length = 485
Score = 31.1 bits (67), Expect = 0.94
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Frame = +1
Query: 415 LRRGYVAGDSKNNPPKGAAD---------FTAQVIVLNHPVKSQTVTHQYWIATLPTLPA 567
+RR V GD+ PP+ A+ + Q VLNHP +TH W +TL +L A
Sbjct: 333 VRRDLVKGDTAVLPPEFLAETAERGLMASWCPQQDVLNHPAVGAFLTHSGWNSTLESLAA 392
>01_05_0589 + 23459847-23460344,23460493-23461296
Length = 433
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 484 QVIVLNHPVKSQTVTHQYWIATLPTLPA 567
QV+VLNHP VTH W +TL + A
Sbjct: 299 QVLVLNHPAVGVFVTHCGWNSTLEAVSA 326
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 277 PGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDS---K 447
P TIV +P T KSVE +E L A G ++G + + + G+ K
Sbjct: 262 PSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYAELRGEKAAIK 321
Query: 448 NNPPKGAADFTAQVIVLNH 504
+ +F A++ VL H
Sbjct: 322 KMDMQATHEFLAELKVLTH 340
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 241 RARRQVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 417
++ +++E L G +VV +P N ++ E+H +A +N F+V+ + K +
Sbjct: 1417 KSMKEIEGSQLTSGKVVVDSPTNDIWQIGRYEVHRSLASDA--SENHSFSVQQTAPKRM 1473
>01_06_0017 + 25592255-25593730
Length = 491
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 484 QVIVLNHPVKSQTVTHQYWIATLPTLPA 567
Q+++LNHP VTH W +TL + A
Sbjct: 355 QMLILNHPAVGGFVTHCGWNSTLEAVTA 382
>01_05_0587 + 23452275-23453759
Length = 494
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 484 QVIVLNHPVKSQTVTHQYWIATLPTLPA 567
Q+++LNHP VTH W +TL + A
Sbjct: 358 QMLILNHPAVGGFVTHCGWNSTLEAVSA 385
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 99 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 10
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>01_06_0018 + 25609571-25611061
Length = 496
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 484 QVIVLNHPVKSQTVTHQYWIATLPTLPA 567
QV+VLNHP VTH W + L + A
Sbjct: 360 QVLVLNHPAVGGFVTHCGWNSVLEAVSA 387
>04_04_0511 -
25800371-25800454,25800563-25800629,25800903-25801000,
25801094-25801152,25801247-25801379,25801461-25801532,
25801628-25801678,25802000-25802111,25802231-25802604
Length = 349
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 247 RRQVETGVLKPGTIVVFAPANITTEVKSVEMHHEAL-QEAVPGDNVGFNV-KNVSVKELR 420
R ++E + +F P+ + SV +H + E + GDN ++ +N + +
Sbjct: 19 RFEMEMARITGKEAALFVPSGTMANLISVLVHCDTRGSEVILGDNSHIHIYENGGISTI- 77
Query: 421 RGYVAGDSKNNPPKGAADFTAQVIVLNHP 507
G V + N P G D V+ + HP
Sbjct: 78 -GGVHPKTVRNNPDGTMDIDKIVVAIRHP 105
>04_01_0282 - 3764110-3764666,3765117-3765180
Length = 206
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 324 DFSSDVGGGKDNNGTWFQHTSFNLPTGTVP--IPPILYTS 211
D + +GGG GTW++H P ++P PP + +S
Sbjct: 142 DLAVGLGGGGLRGGTWWRHGGVASPPASLPPLAPPSVVSS 181
>11_01_0246 +
1887680-1887838,1887942-1888064,1888177-1888263,
1888401-1888505,1888693-1888854,1889429-1889464,
1889594-1889665,1890270-1890414,1891213-1891505
Length = 393
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 733 DSKTTEGWEFWKDSTHRGLEGTKLT 659
+ + GW+ WKD RG KLT
Sbjct: 366 EEEKARGWDDWKDDNPRGAGNKKLT 390
>06_03_1165 - 28106604-28106915
Length = 103
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 321 SQICGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 437
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 439 DSKNNPPKGAADFTAQVIVLNHPVKSQTVTHQYWIATLPTLP 564
DS N+ P G + + LN+P+ S + + YW+ P P
Sbjct: 20 DSPNSAPPGGVPQSITAL-LNNPLPSASSSSYYWLTWPPPTP 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,105,304
Number of Sequences: 37544
Number of extensions: 515324
Number of successful extensions: 1583
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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