Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00499
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q74P83 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_Q74P83 Cluster: Putative uncharacterized protein; n=1;
           Bacillus cereus ATCC 10987|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ATCC 10987)
          Length = 378

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = -2

Query: 498 FFLSKKKQ*INKMYFMLIYETVNDDERDTSERSRKNARTRLSVTFGRTRRFDVFAVCARA 319
           FF     + IN++Y++ I E   +   D  E     + T++     +T  FDV+ V    
Sbjct: 177 FFSGLDPEDINQIYYVTIKEYFKELNLDILEHV---SDTQILYETVKTEEFDVYFVKKGQ 233

Query: 318 FRILYINI------IIFEISNLKIYNNNI*NTVV 235
           FRI  I I      I ++  N+ ++N ++ N ++
Sbjct: 234 FRIAVIKIENKIKFITYDQENILVHNTDVENIII 267


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,867,678
Number of Sequences: 1657284
Number of extensions: 4364537
Number of successful extensions: 11592
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 11306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11588
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)