Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00498
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 128 3e-30
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 128 3e-30
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 52 5e-07
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 52 5e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 49 3e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 48 7e-06
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 35 0.056
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 35 0.056
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 35 0.056
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 33 0.23
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 33 0.30
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 33 0.30
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 33 0.30
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 33 0.30
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 33 0.30
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 32 0.40
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 32 0.40
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 32 0.52
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 0.69
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical ... 30 2.1
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 30 2.1
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 3.7
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 29 3.7
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 3.7
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 4.9
Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 28 6.4
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 28 8.5
AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 128 bits (310), Expect = 3e-30
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +1
Query: 55 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 234
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 235 KDEQDR 252
KDEQ+R
Sbjct: 61 KDEQER 66
Score = 110 bits (265), Expect = 9e-25
Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 ITIKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEV 410
ITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSEV
Sbjct: 68 ITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEV 127
Query: 411 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIA 509
TAALRVTDGAL QTETVLRQAIA
Sbjct: 128 TAALRVTDGALVVVDCVSGVCVQTETVLRQAIA 160
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/70 (55%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 458 CVWCVCTNRNSTA-SGYCERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 634
CV VC + ERIKP+LFMNKMDR +QTFQRIVEN+NVIIA
Sbjct: 143 CVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIA 202
Query: 635 TYNDDGGPMG 664
TY DD GPMG
Sbjct: 203 TYGDDDGPMG 212
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 661 G*VRVDPSKGSVGFGSGLHGWAFTLKQFSEMYA 759
G + VDPS G+VGFGSGLHGWAFTLKQF+EMYA
Sbjct: 212 GPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYA 244
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 128 bits (310), Expect = 3e-30
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +1
Query: 55 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 234
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 235 KDEQDR 252
KDEQ+R
Sbjct: 61 KDEQER 66
Score = 107 bits (258), Expect = 7e-24
Identities = 63/93 (67%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 ITIKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEV 410
ITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSEV
Sbjct: 68 ITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEV 127
Query: 411 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIA 509
TAAL VTDGAL QTETVLRQAIA
Sbjct: 128 TAALGVTDGALVVVDCVSGVCVQTETVLRQAIA 160
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/70 (55%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 458 CVWCVCTNRNSTA-SGYCERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 634
CV VC + ERIKP+LFMNKMDR +QTFQRIVEN+NVIIA
Sbjct: 143 CVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIA 202
Query: 635 TYNDDGGPMG 664
TY DD GPMG
Sbjct: 203 TYGDDDGPMG 212
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 661 G*VRVDPSKGSVGFGSGLHGWAFTLKQFSEMYA 759
G + VDPS G+VGFGSGLHGWAFTLKQF+EMYA
Sbjct: 212 GPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYA 244
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +1
Query: 106 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 252
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+ R+ D+R+DEQ R
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTR 67
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +3
Query: 360 LINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIASASSL 524
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ I + ++
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNGQAM 138
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 676 DPSKGSVGFGSGLHGWAFTLKQFSEMYADNSRL 774
DP+KG+V F S LH +AF + F+++ A+ ++
Sbjct: 201 DPAKGNVIFSSALHSYAFGCEDFAQIAAEKMKV 233
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +1
Query: 106 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 252
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+ R+ D+R+DEQ R
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTR 67
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +3
Query: 360 LINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIASASSL 524
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ I + ++
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNGQAM 138
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 676 DPSKGSVGFGSGLHGWAFTLKQFSEMYADNSRL 774
DP+KG+V F S LH +AF + F+++ A+ ++
Sbjct: 201 DPAKGNVIFSSALHSYAFGCEDFAQIAAEKMKV 233
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +3
Query: 312 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETV 491
V I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE
Sbjct: 189 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 245
Query: 492 LRQAI 506
+R AI
Sbjct: 246 IRHAI 250
Score = 34.3 bits (75), Expect = 0.098
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 88 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDR*SPL 264
+MD +RN+++ H+ HGK+T D L+ + A + RFTD E+ R +
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSI 184
Query: 265 NLRP 276
+P
Sbjct: 185 KSQP 188
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +3
Query: 312 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETV 491
V I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE
Sbjct: 64 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 120
Query: 492 LRQAI 506
+R AI
Sbjct: 121 IRHAI 125
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 91 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDR*SPLN 267
MD +RN+++ H+ HGK+T D L+ + A + RFTD E+ R +
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIK 60
Query: 268 LRP 276
+P
Sbjct: 61 SQP 63
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = +3
Query: 354 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 500
G IN+ID+PGHVDF+ EV ALRV DGA+ QT TV RQ
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQ 159
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 109 IRNMSVIAHVDHGKSTLTDSLVSKAGII 192
IRN+ + AH+D GK+T+T+ ++ AG I
Sbjct: 44 IRNIGISAHIDSGKTTVTERILYYAGRI 71
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +3
Query: 351 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 443
+G+L+NLID+PGHVDFS+EV+ +L V DG L
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSLAVCDGIL 130
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 109 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 252
IRN ++AHVDHGKSTL D L+ G + G+ + D + E++R
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLLEMCGAVP---PGQKQMLDKLQVERER 86
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 351 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 503
KG INLID+PGHVDF EV +RV DG + QT TV RQ+
Sbjct: 88 KGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQS 138
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 109 IRNMSVIAHVDHGKSTLTDSLVSKAGII 192
+RN+ VIAHVD GK+T+T+ L+ AG I
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAI 52
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.056
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 115 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR*SPLN 267
N+ I HVDHGK+TLT ++ GA+ + D +E+ R +N
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 101
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.056
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 115 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR*SPLN 267
N+ I HVDHGK+TLT ++ GA+ + D +E+ R +N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.056
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 115 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR*SPLN 267
N+ I HVDHGK+TLT ++ GA+ + D +E+ R +N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 40 HKPSKMVNFTVDEIRGMMDKKRN-IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 216
H P K+ DE+ M ++KRN + N A+++ + +S+ S I G A
Sbjct: 610 HVPEKVAEDIADEVARMTEQKRNYMENHRDYANLNRRVDQMQESVFSIVDRIEGVNATLQ 669
Query: 217 RFTDTRKDEQDR*SPLNLRPSLCSSSLKRKI*YSSQTLTSV 339
R +QD + ++L L + R+ T+TS+
Sbjct: 670 TIEKQRVQQQDGGNLMDLSALLTNQVRNRESAARRPTITSI 710
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 91 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 186
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 91 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 186
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 91 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 186
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 91 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 186
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 91 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 186
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 115 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR*SPLNLRPSLCSSS 294
N+ I H+DHGK+TLT ++ A+ + D K+E+ R +N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 295 LKR 303
L+R
Sbjct: 107 LRR 109
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 115 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR*SPLNLRPSLCSSS 294
N+ I H+DHGK+TLT ++ A+ + D K+E+ R +N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 295 LKR 303
L+R
Sbjct: 107 LRR 109
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -1
Query: 508 AIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWS 329
AI ++ + T +T STT+ P +T + + +E T S+ P L RW
Sbjct: 692 AIFAEASTGIITTDEETTSTTSTTPEITSTKEIVTESAITQTSVSVVESSTPRQLPERWK 751
Query: 328 GFVMNTK 308
V K
Sbjct: 752 AIVNKFK 758
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 94 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 219
D +R ++++ HVDHGK+TL D++ + I AG G T+
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM-RNSQIAAGEFGGITQ 191
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 493 STVSVCTHTPDTQSTTTRAPSVTRS-AAVTSEEKSTCPGESIKLIKKP 353
+T + T T T +TTT P+ T + A TSE +T P + + KP
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKP 269
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 493 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKK 356
+T + T + +TTT APS T + VT K P E KL+KK
Sbjct: 764 TTAAPSTKPAEETTTTTEAPSTT-TKPVTVAVKKVSPEEMEKLVKK 808
>AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical
protein C47F8.8 protein.
Length = 347
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 470 HTRHTVNNHKGSISDTECSCYFRREINV 387
H T H G IS T C+ +FRR I +
Sbjct: 15 HNTETTRRHFGIISCTACAAFFRRSIGM 42
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 463 DTQSTTTRAPSVTRSAAVTSEEKSTCPGESIK 368
D+ +T R+P TRS ++TS + C G+ I+
Sbjct: 174 DSANTILRSPYSTRSDSITSVDSGQCSGDQIE 205
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 493 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCP 383
ST + T T T +TTT AP+ T + T+E P
Sbjct: 210 STSTTTTTTTSTTTTTTEAPTTTTTIKTTTESIEPIP 246
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 142 DRRGRSQTCCGYSASCPSSHG 80
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 121 SVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR*SPLNLRPSLCSSSLK 300
+++ D GK+TL ++L S AG G A +F TR+ S +N R SS
Sbjct: 51 AIVGVADSGKTTLLEALTSGAGGDIGGIAMLDKFMLTRRRFNKFCSHINYRNQYPSSLSV 110
Query: 301 RKI*Y 315
R + Y
Sbjct: 111 RSLLY 115
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 142 DRRGRSQTCCGYSASCPSSHG 80
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 57 GEFHGRRDPWDDGQEAEYPQHVCDR 131
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 57 GEFHGRRDPWDDGQEAEYPQHVCDR 131
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical
protein F40E10.5 protein.
Length = 284
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -1
Query: 475 THTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESI---KLIKKPFSLF 341
T T T +TTT AP++ + + T+E+ +T +I + +K FS F
Sbjct: 218 TTTTTTTTTTTEAPTMPEAVSSTTEQSTTTTAAAIIAEETKEKEFSAF 265
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical protein
R08E3.1b protein.
Length = 1465
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 493 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 404
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein
R08E3.1a protein.
Length = 1512
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 493 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 404
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 496 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 389
++T + T T T +TTT P+ + A + +KST
Sbjct: 163 KTTTTTTTSTTSTSTTTTEKPTTATTTARVTPKKST 198
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 376 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLMVINGL 245
S+ L+ PF L +R +G+ + FSS S + MAV ++ + +
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVLSLQSV 111
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 493 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 389
+T + + T + +TTT AP+ T S VT+ E +T
Sbjct: 235 TTTTTESPTTEASTTTTEAPTTTTSEEVTTTEITT 269
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -1
Query: 466 PDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKSFSSSSK 287
P TQSTTT + T + ++ S K C +K ++ F+R S K SS ++
Sbjct: 413 PSTQSTTTMKSTTTATTSM-STTKKVCAKSDLK-CANGWTSFNRTSTNPFCFKVISSYNQ 470
Query: 286 NIEMAVDLMVING 248
+ E + L +G
Sbjct: 471 SYEQSEALCAASG 483
>Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical
protein ZK809.7 protein.
Length = 273
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 443 CGC*LCVWCVCTNRNSTASGYCERIKPILFMNK 541
CG C C+ T+RN T E +P+ F+ K
Sbjct: 232 CGHVACYTCIATSRNMTCPLCSENAEPMEFLAK 264
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 111 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQLPYLVP 1
DIP+ + ++ YR+I +++W F+LL Y +P
Sbjct: 121 DIPVDI---SEREYRQISYYQWVPFFLLLQAFLYYIP 154
>AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical
protein T05A8.6 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 493 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKP 353
+T T T T TTT+AP T + A T+ + C S ++ P
Sbjct: 74 TTPGATTVTTTTAPTTTKAPDCTTTTAPTTTKAPDCTTCSQDILTDP 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,453,040
Number of Sequences: 27780
Number of extensions: 395140
Number of successful extensions: 1508
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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