Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00495
         (821 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047560-1|AAK77292.1|  524|Drosophila melanogaster GH07444p pro...    50   5e-06
AE014296-809|AAF47872.1|  524|Drosophila melanogaster CG1309-PA ...    50   5e-06
AY071269-1|AAL48891.1|  555|Drosophila melanogaster RE30177p pro...    30   3.3  
AE014134-2397|AAF53330.3|  555|Drosophila melanogaster CG16863-P...    30   3.3  
AE014134-2396|ABI31315.1|  661|Drosophila melanogaster CG16863-P...    30   3.3  

>AY047560-1|AAK77292.1|  524|Drosophila melanogaster GH07444p
           protein.
          Length = 524

 Score = 49.6 bits (113), Expect = 5e-06
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
 Frame = +3

Query: 507 RFD--FSAWPVTFTADPEERQESWLQNHPFAKCANMDLPVYQRVIIQILAFIAAHTFGIR 680
           RFD  F+AWPV F    + +  +     P       +      +  + +A++A +TFG+ 
Sbjct: 128 RFDIEFNAWPVDF----DVKALTGDTKKPVVTARRREPIQLATLPCEAIAYLAINTFGLS 183

Query: 681 LIYPGSLFLIHNLLWSGLLSGRTQLVESTTG 773
           +IYPGS+ L+  L+   L+SGR +L+E   G
Sbjct: 184 MIYPGSVKLLQKLMRPMLISGRAKLIEDDNG 214



 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +1

Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
           +GYY +PL+  ++ +RG+L  + + TL +    +G I  +  VMR  GR  S  Y   I 
Sbjct: 49  VGYYTSPLLVTFLYRRGYLVTDSIPTLAKITTSVGLIVILSLVMRGLGRKQSRSYSNMIK 108

Query: 451 TL 456
            L
Sbjct: 109 AL 110


>AE014296-809|AAF47872.1|  524|Drosophila melanogaster CG1309-PA
           protein.
          Length = 524

 Score = 49.6 bits (113), Expect = 5e-06
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
 Frame = +3

Query: 507 RFD--FSAWPVTFTADPEERQESWLQNHPFAKCANMDLPVYQRVIIQILAFIAAHTFGIR 680
           RFD  F+AWPV F    + +  +     P       +      +  + +A++A +TFG+ 
Sbjct: 128 RFDIEFNAWPVDF----DVKALTGDTKKPVVTARRREPIQLATLPCEAIAYLAINTFGLS 183

Query: 681 LIYPGSLFLIHNLLWSGLLSGRTQLVESTTG 773
           +IYPGS+ L+  L+   L+SGR +L+E   G
Sbjct: 184 MIYPGSVKLLQKLMRPMLISGRAKLIEDDNG 214



 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +1

Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
           +GYY +PL+  ++ +RG+L  + + TL +    +G I  +  VMR  GR  S  Y   I 
Sbjct: 49  VGYYTSPLLVTFLYRRGYLVTDSIPTLAKITTSVGLIVILSLVMRGLGRKQSRSYSNMIK 108

Query: 451 TL 456
            L
Sbjct: 109 AL 110


>AY071269-1|AAL48891.1|  555|Drosophila melanogaster RE30177p
           protein.
          Length = 555

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 462 SHGRQECVS-----EGDQEIRFDFSAWPVTFTADPEERQESWLQNHPF 590
           SHG+Q  V+     E D EI   F A   T  ADP +  E   + HPF
Sbjct: 451 SHGKQRIVNGSNGPEADDEIARYFCAGMSTLRADPFQLWEELAEAHPF 498


>AE014134-2397|AAF53330.3|  555|Drosophila melanogaster CG16863-PA,
           isoform A protein.
          Length = 555

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 462 SHGRQECVS-----EGDQEIRFDFSAWPVTFTADPEERQESWLQNHPF 590
           SHG+Q  V+     E D EI   F A   T  ADP +  E   + HPF
Sbjct: 451 SHGKQRIVNGSNGPEADDEIARYFCAGMSTLRADPFQLWEELAEAHPF 498


>AE014134-2396|ABI31315.1|  661|Drosophila melanogaster CG16863-PB,
           isoform B protein.
          Length = 661

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 462 SHGRQECVS-----EGDQEIRFDFSAWPVTFTADPEERQESWLQNHPF 590
           SHG+Q  V+     E D EI   F A   T  ADP +  E   + HPF
Sbjct: 557 SHGKQRIVNGSNGPEADDEIARYFCAGMSTLRADPFQLWEELAEAHPF 604


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,264,039
Number of Sequences: 53049
Number of extensions: 811960
Number of successful extensions: 1863
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)