Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00494
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z82089-3|CAB05004.2|  634|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81499-5|CAB04091.2|  634|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U52003-8|AAM97990.1|  441|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458  RPFA-ARFDSLTRLPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKRVIKTT 613
            R FA   F+  +  PY  V+ W+   E +  PEQ++VYT +      R +K++
Sbjct: 4326 REFAIVEFEPESGQPYTTVSTWQ---ETSDLPEQVEVYTDENGRQITRTVKSS 4375


>Z82089-3|CAB05004.2|  634|Caenorhabditis elegans Hypothetical
           protein ZK270.2b protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458 RPFA-ARFDSLTRLPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKRVIKTT 613
           R FA   F+  +  PY  V+ W+   E +  PEQ++VYT +      R +K++
Sbjct: 419 REFAIVEFEPESGQPYTTVSTWQ---ETSDLPEQVEVYTDENGRQITRTVKSS 468


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458  RPFA-ARFDSLTRLPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKRVIKTT 613
            R FA   F+  +  PY  V+ W+   E +  PEQ++VYT +      R +K++
Sbjct: 4315 REFAIVEFEPESGQPYTTVSTWQ---ETSDLPEQVEVYTDENGRQITRTVKSS 4364


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458  RPFA-ARFDSLTRLPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKRVIKTT 613
            R FA   F+  +  PY  V+ W+   E +  PEQ++VYT +      R +K++
Sbjct: 4326 REFAIVEFEPESGQPYTTVSTWQ---ETSDLPEQVEVYTDENGRQITRTVKSS 4375


>Z81499-5|CAB04091.2|  634|Caenorhabditis elegans Hypothetical
           protein ZK270.2b protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458 RPFA-ARFDSLTRLPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKRVIKTT 613
           R FA   F+  +  PY  V+ W+   E +  PEQ++VYT +      R +K++
Sbjct: 419 REFAIVEFEPESGQPYTTVSTWQ---ETSDLPEQVEVYTDENGRQITRTVKSS 468


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458  RPFA-ARFDSLTRLPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKRVIKTT 613
            R FA   F+  +  PY  V+ W+   E +  PEQ++VYT +      R +K++
Sbjct: 4315 REFAIVEFEPESGQPYTTVSTWQ---ETSDLPEQVEVYTDENGRQITRTVKSS 4364


>U52003-8|AAM97990.1|  441|Caenorhabditis elegans Hypothetical
           protein ZK381.5b protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 421 FW-NQDSSSKCE-LKTLCRQIRLSHQTTICTRRHVEEG*RKNKEPRTDRRVHGSTERCEK 594
           FW NQD S   + LKT     RL +    C +R +EEG       RT +R H S  RC+ 
Sbjct: 14  FWSNQDYSIIQQILKT-----RLEYVNFQCPKR-LEEGEISVMAARTGKRYHPSCFRCQ- 66

Query: 595 TCD 603
           TCD
Sbjct: 67  TCD 69


>U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical
           protein F26A1.11 protein.
          Length = 239

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 128 RDSFAANVLSLLQITYNKQHFHNIC 54
           R SF  NVL  LQ  Y  ++F NIC
Sbjct: 214 RASFVVNVLYNLQKLYKNKYFFNIC 238


>Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical
           protein F45G2.3 protein.
          Length = 639

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 521 KKGKEKTKNPEQIDVYTVQQKGVRKRVIKTTLSAFWKQDSV 643
           + G  KTKNP +   +    + V +++ KTT+ A  +++SV
Sbjct: 574 ENGVPKTKNPFRCPAFVKPTQKVEEKIEKTTILAALEENSV 614


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,794,677
Number of Sequences: 27780
Number of extensions: 425976
Number of successful extensions: 1281
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)