Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00491
(735 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 173 2e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 167 1e-43
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 167 1e-43
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 69 6e-14
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.0
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 3.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 173 bits (420), Expect = 2e-45
Identities = 82/98 (83%), Positives = 88/98 (89%)
Frame = +2
Query: 8 REAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP 187
+EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP 359
Query: 188 VLDCXTAHIACKFAEIKEKVDRLLVNLLKSTQNPSSLE 301
VLDC TAHIACKFA+IKEK DR N + +NP S++
Sbjct: 360 VLDCHTAHIACKFADIKEKCDRR--NGKTTEENPKSIK 395
Score = 112 bits (270), Expect = 3e-27
Identities = 53/60 (88%), Positives = 56/60 (93%)
Frame = +1
Query: 259 GKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 438
GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 384 GKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 167 bits (405), Expect = 1e-43
Identities = 78/97 (80%), Positives = 85/97 (87%)
Frame = +2
Query: 11 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 190
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPV
Sbjct: 301 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPV 360
Query: 191 LDCXTAHIACKFAEIKEKVDRLLVNLLKSTQNPSSLE 301
LDC TAHIACKFAEIKEK DR + +NP S++
Sbjct: 361 LDCHTAHIACKFAEIKEKCDRRTGK--TTEENPKSIK 395
Score = 111 bits (267), Expect = 7e-27
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = +1
Query: 256 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVN 435
TGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V
Sbjct: 383 TGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVT 442
Query: 436 F 438
F
Sbjct: 443 F 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 167 bits (405), Expect = 1e-43
Identities = 78/97 (80%), Positives = 85/97 (87%)
Frame = +2
Query: 11 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 190
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPV
Sbjct: 12 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPV 71
Query: 191 LDCXTAHIACKFAEIKEKVDRLLVNLLKSTQNPSSLE 301
LDC TAHIACKFAEIKEK DR + +NP S++
Sbjct: 72 LDCHTAHIACKFAEIKEKCDRRTGK--TTEENPKSIK 106
Score = 44.8 bits (101), Expect = 9e-07
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1
Query: 256 TGKSTEVNPKSIKSGDAAIVNLVPSK 333
TGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 94 TGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 68.5 bits (160), Expect = 6e-14
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 8 REAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 103
+EAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 583 CSPFFLRNTFR*MKYRSCMKN 521
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 56 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 163
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 175 RLHTSIGLXHCPHC 216
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 201 TLPTLPANLQKSKKK 245
TLP+LP+ L K+ K+
Sbjct: 674 TLPSLPSTLTKNSKQ 688
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,333
Number of Sequences: 438
Number of extensions: 4007
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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