Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00490
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    24   1.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.3  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -3

Query: 409 HHNENYLVLKARFATQNYTSYNNNNRYIY 323
           HHNE Y     +F    Y   N   R+ Y
Sbjct: 93  HHNEKYFPEPEKFDPNRYLPENQAKRHNY 121


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -3

Query: 577 LKYIISCSIEFKE*IFRLERISIQRLIIMKCSEHFKTSNVY 455
           L Y +     FK  IF  +   I RL+ +     +  SNVY
Sbjct: 27  LIYTVGVVYSFKRRIFYQDESPISRLVYIGTDLSYFISNVY 67


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -2

Query: 647 FQHIYVNILIY 615
           ++H+YVNILI+
Sbjct: 137 YKHLYVNILIH 147


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -2

Query: 647 FQHIYVNILIY 615
           ++H+YVNILI+
Sbjct: 137 YKHLYVNILIH 147


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 382 KARFATQNYTSYNNNNR 332
           K R  TQN T  NNN++
Sbjct: 316 KVRAKTQNATPANNNDK 332


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 382 KARFATQNYTSYNNNNR 332
           K R  TQN T  NNN++
Sbjct: 316 KVRAKTQNATPANNNDK 332


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 527 TRTNFNTASHYNEMFRTLQNFQCIHI 450
           T TN        E   T  +F+CIH+
Sbjct: 63  TTTNLKRFYKVVEKILTQSSFECIHL 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,377
Number of Sequences: 336
Number of extensions: 2727
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)