Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00488
(737 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5Y1 Cluster: Myb-MuvB complex subunit Lin-52; n=1; B... 140 2e-32
UniRef50_Q17CH2 Cluster: Putative uncharacterized protein; n=2; ... 67 4e-10
UniRef50_UPI0000D55E20 Cluster: PREDICTED: similar to CG15929-PA... 62 1e-08
UniRef50_UPI00015B445E Cluster: PREDICTED: similar to Myb-MuvB c... 59 1e-07
UniRef50_UPI0000F2B341 Cluster: PREDICTED: similar to chromosome... 52 1e-05
UniRef50_UPI0000E239B8 Cluster: PREDICTED: hypothetical protein;... 52 1e-05
UniRef50_Q52LA3 Cluster: Lin-52 homolog; n=20; Eumetazoa|Rep: Li... 52 1e-05
UniRef50_Q5DFG3 Cluster: SJCHGC04604 protein; n=1; Schistosoma j... 50 5e-05
UniRef50_Q9W482 Cluster: CG15929-PA; n=3; Sophophora|Rep: CG1592... 46 7e-04
>UniRef50_Q2F5Y1 Cluster: Myb-MuvB complex subunit Lin-52; n=1;
Bombyx mori|Rep: Myb-MuvB complex subunit Lin-52 -
Bombyx mori (Silk moth)
Length = 122
Score = 140 bits (340), Expect = 2e-32
Identities = 66/81 (81%), Positives = 67/81 (82%)
Frame = +3
Query: 9 VAAKQNSIVDDQASSDDIPXXXXXXXXXXXXXXDRASPELWPEQIPGVSEFAPMPGTQEP 188
+AAKQNSIVDDQASSDDIP DRASPELWPEQIPGVSEFAPMPGTQEP
Sbjct: 1 MAAKQNSIVDDQASSDDIPLTSLEESLFSSEKLDRASPELWPEQIPGVSEFAPMPGTQEP 60
Query: 189 SWNEGLTKQDYTYMQQLGTLT 251
SWNEGLTKQDYTYMQQLGTLT
Sbjct: 61 SWNEGLTKQDYTYMQQLGTLT 81
Score = 82.6 bits (195), Expect = 9e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2
Query: 257 GLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQR 373
GLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQR
Sbjct: 84 GLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQR 122
>UniRef50_Q17CH2 Cluster: Putative uncharacterized protein; n=2;
Endopterygota|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 121
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = +2
Query: 251 SGGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQR 373
S G+I EVKKL+D AYQLG++EAKEMTRGKYLNIF S R++
Sbjct: 80 SNGIIAEVKKLYDQAYQLGVQEAKEMTRGKYLNIFTSSRKK 120
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEF-APMPGTQEPSWNEGLTKQDYTYMQQLGTLTA 254
DR SPE+WP + P ++EF P P+W +GLT+ D M QLG L++
Sbjct: 31 DRGSPEIWPAKGPSMNEFNTPNLNFSPPAWTKGLTQDDINSMYQLGALSS 80
>UniRef50_UPI0000D55E20 Cluster: PREDICTED: similar to CG15929-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG15929-PA - Tribolium castaneum
Length = 130
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/41 (60%), Positives = 37/41 (90%)
Frame = +2
Query: 251 SGGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQR 373
+ GLI +VK+LHD+AYQLG+EE+KE+TRGKYLN+F ++++
Sbjct: 89 TAGLISKVKELHDIAYQLGVEESKEVTRGKYLNVFKPRQKQ 129
Score = 40.3 bits (90), Expect = 0.048
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFA---PMPGTQEPSWNEGLTKQDYTYMQQ 236
DRASPE+WPE+ PG+++F P + +++ L++ D Y+ Q
Sbjct: 31 DRASPEIWPEKYPGMTDFVNSFTPPSAVKLPYSKELSQDDQNYLHQ 76
>UniRef50_UPI00015B445E Cluster: PREDICTED: similar to Myb-MuvB
complex subunit Lin-52; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Myb-MuvB complex subunit Lin-52 -
Nasonia vitripennis
Length = 453
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +2
Query: 260 LIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASK 364
+++EVKKL D +Y+LGLEEAKEMTRGKYLNIF K
Sbjct: 419 IVLEVKKLLDASYKLGLEEAKEMTRGKYLNIFKQK 453
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFAPMPGTQE--PSWNEGLTKQDYTYMQQLGTLT 251
DRASP+LWPEQ +++F TQ P W LT +D + + QL ++
Sbjct: 368 DRASPDLWPEQ--SITKFVAQNSTQNEVPVWATNLTAEDTSQLYQLSNMS 415
>UniRef50_UPI0000F2B341 Cluster: PREDICTED: similar to chromosome 14
open reading frame 46; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to chromosome 14 open reading frame
46 - Monodelphis domestica
Length = 196
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFA---PMPGTQE-PSWNEGLTKQDYTYMQQLGTLT 251
DRASP+LWPEQ+PGV+EFA P T P W L D +++LG+LT
Sbjct: 21 DRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAELENDDIDMLKELGSLT 72
>UniRef50_UPI0000E239B8 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 239
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFA---PMPGTQE-PSWNEGLTKQDYTYMQQLGTLT 251
DRASP+LWPEQ+PGV+EFA P T P W + + D +++LG+LT
Sbjct: 57 DRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAEIERDDIDMLKELGSLT 108
>UniRef50_Q52LA3 Cluster: Lin-52 homolog; n=20; Eumetazoa|Rep:
Lin-52 homolog - Homo sapiens (Human)
Length = 116
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFA---PMPGTQE-PSWNEGLTKQDYTYMQQLGTLT 251
DRASP+LWPEQ+PGV+EFA P T P W + + D +++LG+LT
Sbjct: 25 DRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAEIERDDIDMLKELGSLT 76
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +2
Query: 251 SGGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQ 370
+ L+ +V+ L +LAYQLGL+E++EMTRGK+LNI ++
Sbjct: 77 TANLMEKVRGLQNLAYQLGLDESREMTRGKFLNILEKPKK 116
>UniRef50_Q5DFG3 Cluster: SJCHGC04604 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04604 protein - Schistosoma
japonicum (Blood fluke)
Length = 106
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +2
Query: 260 LIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASK 364
L+ ++K L +LAYQ+GLEEAKEMTRGK+LNI +
Sbjct: 72 LMDKIKHLQNLAYQVGLEEAKEMTRGKFLNILGKR 106
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFAPMPGTQ-----EPSWNEGLTKQDYTYMQQLGTLT 251
DR+SP+LWPEQIPGV+EF + P + L K+D + G+L+
Sbjct: 16 DRSSPDLWPEQIPGVTEFLSSRQNEINLHTPPKYATDLDKEDLELIHDFGSLS 68
>UniRef50_Q9W482 Cluster: CG15929-PA; n=3; Sophophora|Rep:
CG15929-PA - Drosophila melanogaster (Fruit fly)
Length = 157
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +2
Query: 260 LIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKR 367
LI ++K +HD YQLGL EA EMTRGK L IF R
Sbjct: 116 LIDKIKSMHDEIYQLGLREAMEMTRGKLLGIFDRDR 151
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 111 RASPELWPEQIPGVSEFAPMPG----TQEPSWNEGLTKQDYTYMQQLGTL 248
R SP WPE+ PG+ EF M T+ ++ LT D + +L L
Sbjct: 62 RPSPVQWPERFPGMDEFLSMSDTPMYTRSTNYTSNLTDDDMVKINELAQL 111
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,190,355
Number of Sequences: 1657284
Number of extensions: 12745820
Number of successful extensions: 29640
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29621
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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