Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00488
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   7.4  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   7.4  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   7.4  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   7.4  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.4  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   9.8  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 254 RCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY-SRNLF 135
           +CK   L+     +     I G L+   +RCK+ Y  R +F
Sbjct: 149 QCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMYDDRKMF 189


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 254 RCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY-SRNLF 135
           +CK   L+     +     I G L+   +RCK+ Y  R +F
Sbjct: 149 QCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMYDDRKMF 189


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 254 RCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY-SRNLF 135
           +CK   L+     +     I G L+   +RCK+ Y  R +F
Sbjct: 149 QCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMYDDRKMF 189


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 254 RCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY-SRNLF 135
           +CK   L+     +     I G L+   +RCK+ Y  R +F
Sbjct: 149 QCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMYDDRKMF 189


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 254 RCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY-SRNLF 135
           +CK   L+     +     I G L+   +RCK+ Y  R +F
Sbjct: 725 QCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMYDDRKMF 765


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 175 PGIGANSDTPGICSGHSSGEALSSFSELKRLS 80
           PG+ A  +T   C  H +   LSS   L+RLS
Sbjct: 378 PGLVAICETMEDCWDHDAEARLSSSCVLERLS 409


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,866
Number of Sequences: 2352
Number of extensions: 14009
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)