Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00488
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094005-1|AAH94005.1| 116|Homo sapiens lin-52 homolog (C. eleg... 52 2e-06
BC094003-1|AAH94003.1| 116|Homo sapiens lin-52 homolog (C. eleg... 52 2e-06
M12154-1|AAA59992.1| 738|Homo sapiens melanotransferrin protein. 32 1.9
BT007377-1|AAP36041.1| 302|Homo sapiens antigen p97 (melanoma a... 32 1.9
BC111947-1|AAI11948.1| 302|Homo sapiens melanoma-associated ant... 32 1.9
BC093920-1|AAH93920.1| 302|Homo sapiens antigen p97 (melanoma a... 32 1.9
BC071910-1|AAH71910.1| 302|Homo sapiens antigen p97 (melanoma a... 32 1.9
BC007550-1|AAH07550.1| 302|Homo sapiens antigen p97 (melanoma a... 32 1.9
BC002623-1|AAH02623.1| 302|Homo sapiens antigen p97 (melanoma a... 32 1.9
BC001875-1|AAH01875.1| 302|Homo sapiens antigen p97 (melanoma a... 32 1.9
>BC094005-1|AAH94005.1| 116|Homo sapiens lin-52 homolog (C.
elegans) protein.
Length = 116
Score = 52.0 bits (119), Expect = 2e-06
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFA---PMPGTQE-PSWNEGLTKQDYTYMQQLGTLT 251
DRASP+LWPEQ+PGV+EFA P T P W + + D +++LG+LT
Sbjct: 25 DRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAEIERDDIDMLKELGSLT 76
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +2
Query: 251 SGGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQ 370
+ L+ +V+ L +LAYQLGL+E++EMTRGK+LNI ++
Sbjct: 77 TANLMEKVRGLQNLAYQLGLDESREMTRGKFLNILEKPKK 116
>BC094003-1|AAH94003.1| 116|Homo sapiens lin-52 homolog (C.
elegans) protein.
Length = 116
Score = 52.0 bits (119), Expect = 2e-06
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 108 DRASPELWPEQIPGVSEFA---PMPGTQE-PSWNEGLTKQDYTYMQQLGTLT 251
DRASP+LWPEQ+PGV+EFA P T P W + + D +++LG+LT
Sbjct: 25 DRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAEIERDDIDMLKELGSLT 76
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +2
Query: 251 SGGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQ 370
+ L+ +V+ L +LAYQLGL+E++EMTRGK+LNI ++
Sbjct: 77 TANLMEKVRGLQNLAYQLGLDESREMTRGKFLNILEKPKK 116
>M12154-1|AAA59992.1| 738|Homo sapiens melanotransferrin protein.
Length = 738
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
>BT007377-1|AAP36041.1| 302|Homo sapiens antigen p97 (melanoma
associated) identified by monoclonal antibodies 133.2
and protein.
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
>BC111947-1|AAI11948.1| 302|Homo sapiens melanoma-associated
antigen p97, isoform 2, precursor protein.
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
>BC093920-1|AAH93920.1| 302|Homo sapiens antigen p97 (melanoma
associated) identified by monoclonal antibodies 133.2
and protein.
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
>BC071910-1|AAH71910.1| 302|Homo sapiens antigen p97 (melanoma
associated) identified by monoclonal antibodies 133.2
and protein.
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
>BC007550-1|AAH07550.1| 302|Homo sapiens antigen p97 (melanoma
associated) identified by monoclonal antibodies 133.2
and protein.
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
>BC002623-1|AAH02623.1| 302|Homo sapiens antigen p97 (melanoma
associated) identified by monoclonal antibodies 133.2
and protein.
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
>BC001875-1|AAH01875.1| 302|Homo sapiens antigen p97 (melanoma
associated) identified by monoclonal antibodies 133.2
and protein.
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 187 GSCVPGIGANSDTPG---ICSGHSSGEALSSFSELKR 86
GSCVPG G S + +C G SSGE + S L+R
Sbjct: 170 GSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLER 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,237,327
Number of Sequences: 237096
Number of extensions: 1968104
Number of successful extensions: 4001
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3991
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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