Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00488
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022297-1|AAY54713.1|  152|Drosophila melanogaster IP04651p pro...    46   4e-05
AY788901-1|AAV54477.1|  157|Drosophila melanogaster Myb-MuvB com...    46   4e-05
AE014298-787|AAF46076.1|  157|Drosophila melanogaster CG15929-PA...    46   4e-05
BT022847-1|AAY55263.1|  726|Drosophila melanogaster IP13006p pro...    32   0.94 
AE014297-672|AAF54166.1|  965|Drosophila melanogaster CG10445-PA...    32   0.94 
BT023850-1|AAZ86771.1| 1028|Drosophila melanogaster IP13787p pro...    29   8.7  
AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-P...    29   8.7  

>BT022297-1|AAY54713.1|  152|Drosophila melanogaster IP04651p
           protein.
          Length = 152

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +2

Query: 260 LIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKR 367
           LI ++K +HD  YQLGL EA EMTRGK L IF   R
Sbjct: 111 LIDKIKSMHDEIYQLGLREAMEMTRGKLLGIFDRDR 146



 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 111 RASPELWPEQIPGVSEFAPMPG----TQEPSWNEGLTKQDYTYMQQLGTL 248
           R SP  WPE+ PG+ EF  M      T+  ++   LT  D   + +L  L
Sbjct: 57  RPSPVQWPERFPGMDEFLSMSDTPMYTRSTNYTSNLTDDDMVKINELAQL 106


>AY788901-1|AAV54477.1|  157|Drosophila melanogaster Myb-MuvB
           complex subunit Lin-52 protein.
          Length = 157

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +2

Query: 260 LIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKR 367
           LI ++K +HD  YQLGL EA EMTRGK L IF   R
Sbjct: 116 LIDKIKSMHDEIYQLGLREAMEMTRGKLLGIFDRDR 151



 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 111 RASPELWPEQIPGVSEFAPMPG----TQEPSWNEGLTKQDYTYMQQLGTL 248
           R SP  WPE+ PG+ EF  M      T+  ++   LT  D   + +L  L
Sbjct: 62  RPSPVQWPERFPGMDEFLSMSDTPMYTRSTNYTSNLTDDDMVKINELAQL 111


>AE014298-787|AAF46076.1|  157|Drosophila melanogaster CG15929-PA
           protein.
          Length = 157

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +2

Query: 260 LIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKR 367
           LI ++K +HD  YQLGL EA EMTRGK L IF   R
Sbjct: 116 LIDKIKSMHDEIYQLGLREAMEMTRGKLLGIFDRDR 151



 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 111 RASPELWPEQIPGVSEFAPMPG----TQEPSWNEGLTKQDYTYMQQLGTL 248
           R SP  WPE+ PG+ EF  M      T+  ++   LT  D   + +L  L
Sbjct: 62  RPSPVQWPERFPGMDEFLSMSDTPMYTRSTNYTSNLTDDDMVKINELAQL 111


>BT022847-1|AAY55263.1|  726|Drosophila melanogaster IP13006p
           protein.
          Length = 726

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 159 TPILPEFVQAIVLVKLYQASPN*KDFPLRMSTEYHRMMLGHQRLNFVSRPLV 4
           TP+    V    L++     PN +D   +     +  MLGH+RLNF+ +PL+
Sbjct: 263 TPVQNRGVDVFALLRFVNV-PNFQDLQ-QWKKNLNESMLGHRRLNFIIKPLM 312


>AE014297-672|AAF54166.1|  965|Drosophila melanogaster CG10445-PA
           protein.
          Length = 965

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 159 TPILPEFVQAIVLVKLYQASPN*KDFPLRMSTEYHRMMLGHQRLNFVSRPLV 4
           TP+    V    L++     PN +D   +     +  MLGH+RLNF+ +PL+
Sbjct: 502 TPVQNRGVDVFALLRFVNV-PNFQDLQ-QWKKNLNESMLGHRRLNFIIKPLM 551


>BT023850-1|AAZ86771.1| 1028|Drosophila melanogaster IP13787p
           protein.
          Length = 1028

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +3

Query: 480 FSLKFLTSNNVVVMRVTLINQPLALW*QAILFTCDHFSDQSHLCKFQFHLNFALL 644
           + LK    NN      T I     L  Q +++  DH +  SHL    F+ NF LL
Sbjct: 685 YQLKVTAHNNAG--STTAIYNFTTLSTQGVIYNNDHSTPVSHLSDLPFYANFKLL 737


>AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-PB
            protein.
          Length = 1876

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +3

Query: 480  FSLKFLTSNNVVVMRVTLINQPLALW*QAILFTCDHFSDQSHLCKFQFHLNFALL 644
            + LK    NN      T I     L  Q +++  DH +  SHL    F+ NF LL
Sbjct: 1431 YQLKVTAHNNAG--STTAIYNFTTLSTQGVIYNNDHSTPVSHLSDLPFYANFKLL 1483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,223,864
Number of Sequences: 53049
Number of extensions: 589735
Number of successful extensions: 1280
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)