Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00487
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      29   0.20 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   1.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.4  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.6  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +3

Query: 162 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEVSVGI--TIDIALWKFETSKYYVTIIDAP 335
           +RTI K  +    +GKG +   W+      +V+V I  T + + W  ET  Y   ++   
Sbjct: 252 QRTIAKQIQMVHSVGKGRYGEVWLAKWRDEKVAVKIFFTTEESSWFRETEIYQTVLMRNE 311

Query: 336 GHRDFIKNMITGTSQADCAVLI 401
               FI   I GT      +LI
Sbjct: 312 NILGFIAADIKGTGSWTQMLLI 333


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -3

Query: 359 VLDEISVSRSINDGNIVLASFELPESNIDCDTDAHLSL*FVQYPSIFEGS 210
           ++  I ++ + +D N +LA   +   N   D+DAHLS     +P   +GS
Sbjct: 434 LMQPIPINMNADDMNNILAPGNMGSLNESGDSDAHLS--HPDHPDNIDGS 481


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 359 VLDEISVSRSINDGNIVLASFELPESNIDCDTDAHLS 249
           ++  I ++ + +D N +LA   +   N   D+DAHLS
Sbjct: 434 LMQPIPINMNADDMNNILAPGNMGSLNESGDSDAHLS 470


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 359 VLDEISVSRSINDGNIVLASFELPESNIDCDTDAHLS 249
           ++  I ++ + +D N +LA   +   N   D+DAHLS
Sbjct: 394 LMQPIPINMNADDMNNILAPGNMGSLNESGDSDAHLS 430


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 347 ISVSRSINDGNIVLASFELPESNIDCDTDAHLS 249
           I ++ + +D N +LA   +   N   D+DAHLS
Sbjct: 422 IPINMNADDMNNILAPGNMGSLNESGDSDAHLS 454


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 563  IKKEVSSYIKKIGYNPAAVAFVP-ISGWHGDNMLELQP 673
            +K +++S I  +   P      P IS  HG+N LEL P
Sbjct: 1075 VKNKLTSQIASV--QPTGKGVCPCISSEHGENELELTP 1110



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +3

Query: 501 IVG*TKWIPLNHHTVSPDLRKSRRK----YPHTSRRLATTQLLSLS 626
           IV  T ++ L+HH + PD+ K+ +     +  T    AT +L+++S
Sbjct: 818 IVVNTLFMALDHHDMDPDMEKALKSGNYFFTATFAIEATMKLIAMS 863


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +2

Query: 467 LARFHPRCQTAHRRVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 598
           L R+    +TAHR    MD++  P        ++++ +++I+KI
Sbjct: 36  LGRYELEKETAHRMAESMDTSHKP------NPLEQKTNAHIEKI 73


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 533 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 625
           PP+S      +KK+   Y+++   N +A  F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,223
Number of Sequences: 2352
Number of extensions: 17484
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)