Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00487
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 312 2e-87
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 306 2e-85
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 194 1e-51
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 169 2e-44
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 1.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 7.1
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 7.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 312 bits (766), Expect = 2e-87
Identities = 168/236 (71%), Positives = 176/236 (74%), Gaps = 5/236 (2%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 237 DKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 416
DKLKAE GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 417 GEFEAGISKNGQTREHALLAFTLGVKQLIVG*TKW---IPLNHHTVSPDLRKSRRKY-PH 584
GEFEAGISKNGQTREHALLAFTLGVKQLIVG K P T +++K Y
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 180
Query: 585 TSRRLATTQLLSLSCPFLDGTETTCWSFNQNAWFKGWQWSVKKAS*R-KMLIEALD 749
A + +S D ++ WFKGW K+ K LIEALD
Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEVS---SKMPWFKGWTVERKEGKVEGKCLIEALD 233
Score = 125 bits (302), Expect = 4e-31
Identities = 60/72 (83%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 VNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKC-LV 685
VNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE+ K
Sbjct: 152 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWF 211
Query: 686 QGMAVERKEGKL 721
+G VERKEGK+
Sbjct: 212 KGWTVERKEGKV 223
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 306 bits (751), Expect = 2e-85
Identities = 159/233 (68%), Positives = 173/233 (74%), Gaps = 2/233 (0%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 237 DKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 416
DKLKAE GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 417 GEFEAGISKNGQTREHALLAFTLGVKQLIVG*TKWIPLNHHTVSPDLRKSRRKYPHTSRR 596
GEFEAGISKNGQTREHALLAFTLGVKQLIVG K + + +++ ++
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 597 LATTQLLSLSCPFLD-GTETTCWSFNQNAWFKGWQWSVKKA-S*RKMLIEALD 749
+ P + + W+KGW+ K + K LIEALD
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALD 233
Score = 115 bits (277), Expect = 4e-28
Identities = 55/70 (78%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 VNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKC-LV 685
VNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLE PK
Sbjct: 152 VNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWY 211
Query: 686 QGMAVERKEG 715
+G VERK+G
Sbjct: 212 KGWKVERKDG 221
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 194 bits (472), Expect = 1e-51
Identities = 112/179 (62%), Positives = 120/179 (67%), Gaps = 5/179 (2%)
Frame = +3
Query: 228 WVLDKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 407
WVLDKLKAE GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 408 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVG*TKW---IPLNHHTVSPDLRKSRRKY 578
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVG K P T +++K Y
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 579 -PHTSRRLATTQLLSLSCPFLDGTETTCWSFNQNAWFKGWQWSVKKAS*R-KMLIEALD 749
A + +S D ++ WFKGW K+ K LIEALD
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVS---SKMPWFKGWTVERKEGKVEGKCLIEALD 176
Score = 125 bits (302), Expect = 4e-31
Identities = 60/72 (83%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 VNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKC-LV 685
VNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE+ K
Sbjct: 95 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWF 154
Query: 686 QGMAVERKEGKL 721
+G VERKEGK+
Sbjct: 155 KGWTVERKEGKV 166
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 169 bits (411), Expect = 2e-44
Identities = 99/163 (60%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Frame = +3
Query: 276 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 455
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 456 REHALLAFTLGVKQLIVG*TKW---IPLNHHTVSPDLRKSRRKY-PHTSRRLATTQLLSL 623
REHALLAFTLGVKQLIVG K P T +++K Y A + +
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 624 SCPFLDGTETTCWSFNQNAWFKGWQWSVKKAS*R-KMLIEALD 749
S D ++ WFKGW K+ K LIEALD
Sbjct: 121 SGWHGDNMLEVS---SKMPWFKGWTVERKEGKVEGKCLIEALD 160
Score = 125 bits (302), Expect = 4e-31
Identities = 60/72 (83%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 VNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKC-LV 685
VNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE+ K
Sbjct: 79 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWF 138
Query: 686 QGMAVERKEGKL 721
+G VERKEGK+
Sbjct: 139 KGWTVERKEGKV 150
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 315 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 69 KTHINIVVIGHVDSGKST 122
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 691 PLNQAFWLKLQHVVSVPSRNGHESDSSWV 605
PL F L L H++ V +N + + WV
Sbjct: 30 PLAVVFGLSLHHIIDVDEKNQILTTNCWV 58
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 78 INIVVIGHVDSGKST 122
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 70 FSLPIFG*SRITNCV*Y 20
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 300 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 401
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 300 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 401
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = -1
Query: 718 LAFFTLHCHPLNQAFWLKLQHVVSVPSR 635
+ +FT+ P+N+ W + + V + R
Sbjct: 1529 ILYFTIQYRPINEFHWTLVSNSVKMQRR 1556
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = -1
Query: 718 LAFFTLHCHPLNQAFWLKLQHVVSVPSR 635
+ +FT+ P+N+ W + + V + R
Sbjct: 1525 ILYFTIQYRPINEFHWTLVSNSVKMQRR 1552
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = -3
Query: 575 LPS*FPQIWAHCMVVQWNPFCLPYDELFDTEGESEQGMLTGLTVLR 438
LP IW+H V FC+ +T + +T TV R
Sbjct: 107 LPPEIYYIWSHFPYVFGEAFCIIQSFAAETSANATVLTITAFTVER 152
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 7.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 634 FWMARRQHVGASTK 675
+W+ +R+H +STK
Sbjct: 593 YWLEKREHRSSSTK 606
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 519 WIPLNHHTVSPDLRKSRRKY 578
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,738
Number of Sequences: 438
Number of extensions: 4512
Number of successful extensions: 30
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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