Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00487
(751 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 271 4e-73
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 271 4e-73
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 271 4e-73
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 271 4e-73
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 155 2e-38
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 153 1e-37
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 89 3e-18
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 82 4e-16
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 50 2e-06
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 50 2e-06
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 47 1e-05
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 45 5e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 43 2e-04
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 42 6e-04
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 40 0.002
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 38 0.007
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 38 0.007
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 33 0.15
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 33 0.15
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 33 0.20
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.27
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 33 0.27
At5g13650.2 68418.m01585 elongation factor family protein contai... 32 0.47
At5g13650.1 68418.m01584 elongation factor family protein contai... 32 0.47
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 31 0.62
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 30 1.4
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.9
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.5
At5g64600.1 68418.m08118 expressed protein similar to axi 1 [Nic... 29 3.3
At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase fa... 29 3.3
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 4.4
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 271 bits (664), Expect = 4e-73
Identities = 129/149 (86%), Positives = 136/149 (91%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 416
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 417 GEFEAGISKNGQTREHALLAFTLGVKQLI 503
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +2
Query: 512 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 664
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 271 bits (664), Expect = 4e-73
Identities = 129/149 (86%), Positives = 136/149 (91%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 416
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 417 GEFEAGISKNGQTREHALLAFTLGVKQLI 503
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +2
Query: 512 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 664
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 271 bits (664), Expect = 4e-73
Identities = 129/149 (86%), Positives = 136/149 (91%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 416
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 417 GEFEAGISKNGQTREHALLAFTLGVKQLI 503
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +2
Query: 512 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 664
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 271 bits (664), Expect = 4e-73
Identities = 129/149 (86%), Positives = 136/149 (91%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 416
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 417 GEFEAGISKNGQTREHALLAFTLGVKQLI 503
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +2
Query: 512 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 664
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 155 bits (377), Expect = 2e-38
Identities = 70/150 (46%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Frame = +3
Query: 72 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 251
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 252 EVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 431
E GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 432 GISK-NGQTREHALLAFTLGVKQLIVG*TK 518
G GQTREHA + GV+Q+IV K
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINK 387
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +2
Query: 509 VNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 661
+NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N++
Sbjct: 385 INKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLV 433
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 153 bits (371), Expect = 1e-37
Identities = 70/147 (47%), Positives = 101/147 (68%)
Frame = +3
Query: 66 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 245
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 246 KAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 425
+ E G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 426 EAGISKNGQTREHALLAFTLGVKQLIV 506
E G + GQTREH LA TLGV +LIV
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIV 244
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 VNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNM 658
VNKMD +S+ R++EI++++ ++K GYN V F+PISG G NM
Sbjct: 246 VNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNM 296
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 89.0 bits (211), Expect = 3e-18
Identities = 53/151 (35%), Positives = 78/151 (51%)
Frame = +3
Query: 54 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 233
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 234 LDKLKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 413
+D E + GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 414 TGEFEAGISKNGQTREHALLAFTLGVKQLIV 506
G QT+EH LLA +GV ++V
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVV 200
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 81.8 bits (193), Expect = 4e-16
Identities = 53/147 (36%), Positives = 73/147 (49%)
Frame = +3
Query: 63 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 242
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107
Query: 243 LKAEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 422
E GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 423 FEAGISKNGQTREHALLAFTLGVKQLI 503
QT+EH LLA +GV L+
Sbjct: 168 MP-------QTKEHILLARQVGVPSLV 187
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 50.0 bits (114), Expect = 2e-06
Identities = 44/151 (29%), Positives = 65/151 (43%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEVS 260
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + E
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 261 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 440
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 441 KNGQTREHALLAFTLGVKQLIVG*TKWIPLN 533
+ Q R + + K +G W LN
Sbjct: 177 VDRQMRRYEVPRVAFINKLDRMGADPWKVLN 207
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 50.0 bits (114), Expect = 2e-06
Identities = 44/151 (29%), Positives = 65/151 (43%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEVS 260
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + E
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 261 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 440
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 441 KNGQTREHALLAFTLGVKQLIVG*TKWIPLN 533
+ Q R + + K +G W LN
Sbjct: 177 VDRQMRRYEVPRVAFINKLDRMGADPWKVLN 207
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/113 (30%), Positives = 51/113 (45%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEVS 260
NI ++ HVD GK+T HLI GG + GK F +D L E
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 261 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 45.2 bits (102), Expect = 5e-05
Identities = 33/117 (28%), Positives = 53/117 (45%)
Frame = +3
Query: 69 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 248
K + NI ++ H+D+GK+TTT ++Y G + E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDW----ME 140
Query: 249 AEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
E GITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 43.2 bits (97), Expect = 2e-04
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Frame = +3
Query: 45 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 224
D K EK N +I H+D GKST L+ G I K G G +Y
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102
Query: 225 AWVLDKLKAEVSVGITIDIALWKFET-------SKYYVTIIDAPGHRDFIKNMITGTSQA 383
LDKL+ E + + A +E S Y + +ID PGH DF + S
Sbjct: 103 ---LDKLQRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSAC 159
Query: 384 DCAVLIVAAGTG 419
A+L+V A G
Sbjct: 160 QGALLVVDAAQG 171
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 41.5 bits (93), Expect = 6e-04
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEVS 260
N +I H+D GKST L+ G + R + K F LD + E
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 261 VGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
GITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 248
N+ VI HVD GKST T L+ G I + + + A E +G + K + L
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGI--SLY 78
Query: 249 AEVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 404
E++ ++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 79 YEMT-DESLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV-LDKLKAEV 257
N+ ++GH+ GK+ L+ + + K EK KY +D+ + +
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYTDTRVDEQERNI 190
Query: 258 SV-GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
S+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 191 SIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV-LDKLKAEV 257
N+ ++GH+ GK+ L+ + + K EK KY +D+ + +
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYTDTRVDEQERNI 190
Query: 258 SV-GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
S+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 191 SIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 300 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 479
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 480 TLGVKQLIV 506
+ +K +I+
Sbjct: 178 MMRLKHIII 186
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 300 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 479
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 480 TLGVKQLIV 506
+ +K +I+
Sbjct: 178 MMRLKHIII 186
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 294 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 461
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 462 HALLAFTLGVKQLIV 506
H + +K +I+
Sbjct: 166 HLAAVEIMQLKHIII 180
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 315 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 312 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 491
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 492 KQLIV 506
K +I+
Sbjct: 174 KDIII 178
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 31.9 bits (69), Expect = 0.47
Identities = 30/113 (26%), Positives = 46/113 (40%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEVS 260
NI ++ HVD GK+T ++ + K ++ Q M + ++D E
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 261 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
GITI V IID PGH DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 31.9 bits (69), Expect = 0.47
Identities = 30/113 (26%), Positives = 46/113 (40%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEVS 260
NI ++ HVD GK+T ++ + K ++ Q M + ++D E
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 261 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 419
GITI V IID PGH DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 181
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/58 (18%), Positives = 30/58 (51%)
Frame = +2
Query: 503 RRVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPK 676
++ NK + + + IKK++ ++ +I Y + + + GW G ++ +++P+
Sbjct: 160 KKKNKTMNKGQVREDDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPE 217
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 548 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM-LELQPKCLVQGMAVERKE 712
PRF ++ ++SS ++ Y AAVAF +S W D + L L+ V G+ + E
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMLSTTE 408
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 321 IIDAPGHRDFIKNMITGTSQADCAVLIV 404
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 321 IIDAPGHRDFIKNMITGTSQADCAVLIV 404
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 321 IIDAPGHRDFIKNMITGTSQADCAVLIV 404
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 315 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 404
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g64600.1 68418.m08118 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 522
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 485 RCQTAHRRVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG--DNM 658
R T+H ++ ++STE E KEV ++K +GY+ + V ++ +G D +
Sbjct: 313 RESTSHWKIKSINSTEQR-EEGLCPLTPKEVGIFLKGLGYSQSTVIYIAAGEIYGGDDRL 371
Query: 659 LELQPK 676
EL+ +
Sbjct: 372 SELKSR 377
>At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1)
(Chromaffin granule ATPase) from {Homo sapiens}
SP|Q9Y2Q0, {Mus musculus} SP|P98200, {Bos taurus}
SP|Q29449; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase; ESTs gb|T45045 and
gb|AA394473 come from this gene
Length = 1203
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 707 YAPLPSLEPSILVEAPTCCLRAIQKWARKRQQL 609
Y+P+ +L P V A + AI+ W RK+Q +
Sbjct: 101 YSPISALLPLTFVIAASMVKEAIEDWGRKKQDI 133
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +3
Query: 240 KLKAEVSVGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 407
K+ A + GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 408 AGTG 419
A G
Sbjct: 585 ADDG 588
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 542 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 631
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,797,858
Number of Sequences: 28952
Number of extensions: 367566
Number of successful extensions: 1147
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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