Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00486
(679 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 48 6e-08
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 40 3e-05
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 39 5e-05
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 32 0.006
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.50
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.2
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 24 1.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 4.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 6.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.2
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 8.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 8.2
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 21 8.2
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 48.4 bits (110), Expect = 6e-08
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 8 SKTFACNSALEIHYRSHTKERPFKCTVCERGF 103
SK+F+ L +H R HTKERP+KC VCER F
Sbjct: 126 SKSFSVKENLSVHRRIHTKERPYKCDVCERAF 157
Score = 44.8 bits (101), Expect = 8e-07
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKERPFKCTVCERGFSTKSS 118
KTFA + L HYR+HT E+P++C C + FS K +
Sbjct: 99 KTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKEN 134
Score = 42.7 bits (96), Expect = 3e-06
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 515 SSALQIHMRTHTGDKPFRCAVCQKAFT 595
S L IHMRTHTG+KP+ C C K FT
Sbjct: 188 SGQLVIHMRTHTGEKPYVCKACGKGFT 214
Score = 41.1 bits (92), Expect = 9e-06
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 533 HMRTHTGDKPFRCAVCQKAFTTKGN 607
H RTHTG+KP++C C K+F+ K N
Sbjct: 110 HYRTHTGEKPYQCEYCSKSFSVKEN 134
Score = 41.1 bits (92), Expect = 9e-06
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 515 SSALQIHMRTHTGDKPFRCAVCQKAF 592
S L++H RTHTG+KP+ C +C K+F
Sbjct: 216 SKQLKVHTRTHTGEKPYTCDICGKSF 241
Score = 40.7 bits (91), Expect = 1e-05
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 8 SKTFACNSALEIHYRSHTKERPFKCTVCERGFS 106
SKTF + L IH R+HT E+P+ C C +GF+
Sbjct: 182 SKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFT 214
Score = 40.7 bits (91), Expect = 1e-05
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKERPFKCTVCERGF 103
K F C+ L++H R+HT E+P+ C +C + F
Sbjct: 211 KGFTCSKQLKVHTRTHTGEKPYTCDICGKSF 241
Score = 39.9 bits (89), Expect = 2e-05
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 515 SSALQIHMRTHTGDKPFRCAVCQKAFTTKG 604
S L HMR HTG++P +C VC K F G
Sbjct: 160 SGKLHRHMRIHTGERPHKCTVCSKTFIQSG 189
Score = 37.5 bits (83), Expect = 1e-04
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 500 QELSSSSALQIHMRTHTGDKPFRCAVCQKAFTTKG 604
+ S L +H R HT ++P++C VC++AF G
Sbjct: 127 KSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSG 161
Score = 36.3 bits (80), Expect = 3e-04
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKERPFKCTVCERGF 103
+ F + L H R HT ERP KCTVC + F
Sbjct: 155 RAFEHSGKLHRHMRIHTGERPHKCTVCSKTF 185
Score = 35.9 bits (79), Expect = 4e-04
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKERPFKCTVCERGFSTKSS 118
K+F N L++H +H E+ +KCT+C F +K +
Sbjct: 239 KSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKT 274
Score = 29.9 bits (64), Expect = 0.023
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 524 LQIHMRTHTGDKPFRCAVCQKAFTTK 601
L++H H G+K ++C +C + F +K
Sbjct: 247 LKLHQVAHYGEKVYKCTLCHETFGSK 272
Score = 29.5 bits (63), Expect = 0.031
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 527 QIHMRTH--TGDKPFRCAVCQKAF 592
Q H+R+H G+ P+RC +C K F
Sbjct: 78 QSHLRSHGKEGEDPYRCNICGKTF 101
Score = 28.3 bits (60), Expect = 0.071
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKER--PFKCTVCERGFS 106
K F + + H RSH KE P++C +C + F+
Sbjct: 69 KAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFA 102
Score = 25.8 bits (54), Expect = 0.38
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 542 THTGDKPFRCAVCQKAFTTK 601
T+ +K ++C +CQKAF K
Sbjct: 55 TNIEEKTYQCLLCQKAFDQK 74
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 39.5 bits (88), Expect = 3e-05
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 524 LQIHMRTHTGDKPFRCAVCQKAF 592
LQ H+RTHTG+KPF C C +AF
Sbjct: 58 LQGHIRTHTGEKPFSCQHCNRAF 80
Score = 34.3 bits (75), Expect = 0.001
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKERPFKCTVCERGFS 106
K F+ L+ H R+HT E+PF C C R F+
Sbjct: 50 KAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFA 81
Score = 31.1 bits (67), Expect = 0.010
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 512 SSSALQIHMRTHTGDKPFRCAVCQKAFT 595
S AL++H+RTHT P +C +C KAF+
Sbjct: 28 SLGALKMHIRTHT--LPCKCHLCGKAFS 53
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 38.7 bits (86), Expect = 5e-05
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 524 LQIHMRTHTGDKPFRCAVCQKAFTTKGNSR 613
L+ HMR HTG+KP+ C+ C + F N R
Sbjct: 25 LKTHMRLHTGEKPYHCSHCDRQFVQVANLR 54
Score = 35.9 bits (79), Expect = 4e-04
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 539 RTHTGDKPFRCAVCQKAFT 595
RTHTG+KPF C C K FT
Sbjct: 2 RTHTGEKPFECPECHKRFT 20
Score = 33.5 bits (73), Expect = 0.002
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKERPFKCTVCERGF 103
K F + L+ H R HT E+P+ C+ C+R F
Sbjct: 17 KRFTRDHHLKTHMRLHTGEKPYHCSHCDRQF 47
Score = 31.1 bits (67), Expect = 0.010
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 524 LQIHMRTHTGDKPFRCAVC 580
L+ H+R HTG++P+ C +C
Sbjct: 53 LRRHLRVHTGERPYACELC 71
Score = 28.3 bits (60), Expect = 0.071
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 50 RSHTKERPFKCTVCERGFS 106
R+HT E+PF+C C + F+
Sbjct: 2 RTHTGEKPFECPECHKRFT 20
Score = 27.9 bits (59), Expect = 0.094
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 35 LEIHYRSHTKERPFKCTVC 91
L H R HT ERP+ C +C
Sbjct: 53 LRRHLRVHTGERPYACELC 71
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 31.9 bits (69), Expect = 0.006
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 524 LQIHMRTHTGDKPFRCAVCQKAFTTK 601
L+ H+R H G KPF+C C + K
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNK 29
Score = 29.5 bits (63), Expect = 0.031
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 35 LEIHYRSHTKERPFKCTVCERGFSTKS 115
LE H R+H +PFKC C KS
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKS 30
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 512 SSSALQIHMRTHTGDKPFRCAVCQKA 589
+ S L H+++H+ +RCA C A
Sbjct: 28 NKSMLNSHLKSHSNVYQYRCANCTYA 53
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +2
Query: 14 TFAC--NSALEIHYRSHTKERPFKCTVC 91
+++C S L H +SH+ ++C C
Sbjct: 23 SYSCVNKSMLNSHLKSHSNVYQYRCANC 50
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 566 RCAVCQKAFTTKGNSRCI 619
+C++CQ+ F +GN C+
Sbjct: 273 KCSLCQRRFEEQGNYSCL 290
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.2
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +3
Query: 228 ANAQDPRHAPGFDKNVVGAPSSEDGRDQSPERRS---PEKLDLKRSPPVHVPPPMNH 389
AN G GAP G S RRS + + SP PPP NH
Sbjct: 1811 ANCAPEEDQYGSQYGQYGAPYDHYGSRGSVGRRSVGSARNIPVSGSPEPPPPPPRNH 1867
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 11 KTFACNSALEIHYRSHTKERP--FKCTVCERGFSTKSS 118
K ++L+ H ER ++C +CER + +++S
Sbjct: 13 KVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNS 50
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 318 ERRSPEKLDLKRSPPVHVPPPMNH 389
ERR+P+ D P + PP+N+
Sbjct: 180 ERRTPDPHDETAKKPRVLSPPLNN 203
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 582 WQTAHLKGLSPVCVLMWICNADDEESSCGTP 490
W T + L+P L +C DE+ C TP
Sbjct: 143 WNTRYC--LTPTERLEALCWTQDEDVICSTP 171
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 582 WQTAHLKGLSPVCVLMWICNADDEESSCGTP 490
W T + L+P L +C DE+ C TP
Sbjct: 196 WNTRYC--LTPTERLEALCWTQDEDIICSTP 224
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 477 KHLCGVCRKNFLRRQRYK 530
KH C R+NF + Q K
Sbjct: 253 KHACAEYRRNFKKMQEEK 270
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 473 IQAFMRGVPQELSSSSALQIHMRTHTGDKPFRCAVCQK 586
I +MR QE L + MR ++CAV +K
Sbjct: 231 IDMYMRRKCQECRLKKCLTVGMRPECVVPEYQCAVKRK 268
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 21.4 bits (43), Expect = 8.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 473 IQAFMRGVPQELSSSSALQIHMRTHTGDKPFRCAVCQK 586
I +MR QE L + MR ++CAV +K
Sbjct: 28 IDMYMRRKCQECRLKKCLTVGMRPECMVPEYQCAVKRK 65
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,845
Number of Sequences: 438
Number of extensions: 4276
Number of successful extensions: 43
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -