Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00485
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-11|CAB54323.1| 489|Caenorhabditis elegans Hypothetical... 117 1e-26
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 30 1.9
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 30 1.9
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 30 1.9
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 29 2.5
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 3.3
AF077546-5|AAC26316.1| 313|Caenorhabditis elegans Hypothetical ... 28 5.8
AF077546-4|AAC26317.2| 704|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 7.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.7
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 7.7
>AL110477-11|CAB54323.1| 489|Caenorhabditis elegans Hypothetical
protein Y113G7B.16 protein.
Length = 489
Score = 117 bits (281), Expect = 1e-26
Identities = 53/82 (64%), Positives = 64/82 (78%)
Frame = +1
Query: 7 EKINNAIQDMPAHQDIAALLSGSYINYFHCLKIIEILKETEADTKNLFGRYGSQRMKDWQ 186
EKI +AI DMP I LL G+YINYFHC +IIEIL++TE DTKN G Y SQRMKDWQ
Sbjct: 37 EKIKHAILDMPESPKIVELLQGAYINYFHCCQIIEILRDTEKDTKNFLGFYSSQRMKDWQ 96
Query: 187 DVERNYEKENLYLAEAAQMLVR 252
++E Y+K+N+YLAEAAQ+L R
Sbjct: 97 EIEGMYKKDNVYLAEAAQILQR 118
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/83 (26%), Positives = 48/83 (57%)
Frame = +3
Query: 261 YEIPGLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKL 440
YEIP L++QI+K +Q+ D +KH++Y K + +F ++ ++G +++EL+
Sbjct: 122 YEIPALRKQISKMDQSVTDAIRKHSEYGKQAEDGRKQFEKEISRMQLKGVHLRKELLELA 181
Query: 441 QELPEIYDQIGKSLKPLQPGIEF 509
+LP Y++I ++ + ++
Sbjct: 182 ADLPAFYEKITAEIRKISAARDY 204
Score = 41.5 bits (93), Expect = 6e-04
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Frame = +2
Query: 473 EITKTTPARYRVYNAFTKYI-LGEDSPEALPILQYVIIHG----NTTVYEWSYGEPPLSL 637
EI K + AR + AF Y+ LG +A PIL + + G + T YEW Y + P +
Sbjct: 194 EIRKISAAR-DYFQAFRDYMSLGAAPKDAAPILPIIGLIGERGLDVTTYEWKYNQKPDKV 252
Query: 638 EPDPIHIEL----DDDE-EQASGDQIDFG 709
E + L D DE + GD+IDFG
Sbjct: 253 EKPNFEMLLTAAEDSDEIDFGGGDEIDFG 281
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 273 GLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQELP 452
GL+ Q+ EQAQ + EKK +Y+ + K EF + + + EK + L+ K E
Sbjct: 869 GLREQL---EQAQHELEKKKREYMW-KLQQKDEFYEIMDRNVKETEKENKRLLRKRTEDK 924
Query: 453 EIYDQIGKSLKPLQ 494
E D +++ Q
Sbjct: 925 ERMDDFMLNIRKAQ 938
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 273 GLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQELP 452
GL+ Q+ EQAQ + EKK +Y+ + K EF + + + EK + L+ K E
Sbjct: 869 GLREQL---EQAQHELEKKKREYMW-KLQQKDEFYEIMDRNVKETEKENKRLLRKRTEDK 924
Query: 453 EIYDQIGKSLKPLQ 494
E D +++ Q
Sbjct: 925 ERMDDFMLNIRKAQ 938
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 294 KEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQELPEIYDQIG 473
K+ Q Q DF ++ AD + + SEF LC+Q ++ E + +L K L E ++
Sbjct: 278 KQRQEQLDFARQLADSEETFSVRISEFEKLCEQKDLKIEDLHSQL-EKCDRLQESLEKAD 336
Query: 474 KS 479
+S
Sbjct: 337 RS 338
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 387 KQLGIQGEKIKRELVAKLQELPEIYDQIGKSLK 485
++ G Q E +KRE A QEL +I DQ+G+ K
Sbjct: 1499 EESGEQTEAVKRENKALAQELKDIADQLGEGGK 1531
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 246 GQEISYEIPGLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKR- 422
G ++S EI Q Q D +++ + K +KS KQ + I
Sbjct: 115 GAKLSLEIQSTSAIELVNYQNQKDHDRRMEGFAKVSEITKSNVSIAIKQDITENHFITAA 174
Query: 423 -ELVAKLQELPEIYDQIGKSLKPLQPGIE 506
+++ QELP++ D + + + L+ GIE
Sbjct: 175 SNMISAGQELPKVVDTLDRPVAGLKKGIE 203
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 294 KEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRE 425
+E+Q DFEK++ + LK E K + KQ+ EK K E
Sbjct: 232 REKQINEDFEKRNQEKLKREEEIKQQNQEREKQINDDFEKRKLE 275
>AF077546-5|AAC26316.1| 313|Caenorhabditis elegans Hypothetical
protein T08E11.3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 115 LKETEADTKNLFGRYGSQRMKDWQDVERNYEKENLYLAEAAQMLVRKL 258
LK+ DT F +G + W+D+E +Y ++ + EA ++ L
Sbjct: 83 LKKNSKDTFEKFTGHGWSKCISWKDLESDYLVDDSIVVEAHVKIINSL 130
>AF077546-4|AAC26317.2| 704|Caenorhabditis elegans Hypothetical
protein T08E11.4 protein.
Length = 704
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 115 LKETEADTKNLFGRYGSQRMKDWQDVERNYEKENLYLAEAAQMLVR 252
L T + T N YG ++ W D+ER Y + + EA +++
Sbjct: 622 LSFTASSTLNEPASYGYDKLIRWDDMERKYAVNDSIIIEARVKIIK 667
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +2
Query: 524 KYILGEDSPEALPILQYVIIHGNTTV----YEWSYGEPPLSLEPDPIHIELDDDEEQAS 688
K +LGE AL +L + I+H + V Y+W +P + + I++D+ ++AS
Sbjct: 421 KEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKKPVIIRSSEQWFIDVDEIGKRAS 479
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E K + A K + +K+K+E AKL++
Sbjct: 7610 KQEANAKLQKEKDDKLKQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKK 7659
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E + K + A K + +K+K+E AKL++
Sbjct: 7730 KQEADAKLKKEKDDKLKQEKNDKLKQEADAKLKKEKDDKLKQEADAKLKK 7779
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E K + A K + +K+K+E AKL++
Sbjct: 8042 KQEANAKLQKEKDDKLKQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKK 8091
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E K + A K + +K+K+E AKL++
Sbjct: 7630 KQEANAKLQKEKDDKLKQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKK 7679
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E + K + A K + +K+K+E AKL++
Sbjct: 7750 KQEADAKLKKEKDDKLKQEKNDKLKQEADAKLKKEKDDKLKQEADAKLKK 7799
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E K + A K + +K+K+E AKL++
Sbjct: 8062 KQEANAKLQKEKDDKLKQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKK 8111
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E K + A K + +K+K+E AKL++
Sbjct: 7630 KQEANAKLQKEKDDKLKQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKK 7679
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E + K + A K + +K+K+E AKL++
Sbjct: 7750 KQEADAKLKKEKDDKLKQEKNDKLKQEADAKLKKEKDDKLKQEADAKLKK 7799
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 297 EEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQGEKIKRELVAKLQE 446
+++A A +K+ D LK E K + A K + +K+K+E AKL++
Sbjct: 8062 KQEANAKLQKEKDDKLKQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKK 8111
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +2
Query: 524 KYILGEDSPEALPILQYVIIHGNTTV----YEWSYGEPPLSLEPDPIHIELDDDEEQAS 688
K +LGE AL +L + I+H + V Y+W +P + + I++D+ ++AS
Sbjct: 421 KEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKKPVIIRSSEQWFIDVDEIGKRAS 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,059,003
Number of Sequences: 27780
Number of extensions: 307513
Number of successful extensions: 1254
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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