Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00484
(770 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 23 2.0
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 23 3.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.7
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 22 6.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 8.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 8.2
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -3
Query: 753 WLLPIIYVQSSYCRLVTFAVQASIWLICNLHTKNIRIK 640
+++P+I + YC + + + L+ N H NI ++
Sbjct: 246 FIIPLIILLILYCIIAKNLMSNAATLVLNKHIDNISLR 283
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 744 PIIYVQSSYCRLVTFAV 694
PI+Y+ SYC +VT +
Sbjct: 153 PILYLIFSYCPIVTTGI 169
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.7
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSEICSMEQLTSVR*QSNTAFCSMMLYIKQRLTLTKKVLWQQLR 463
+PW R HL +S N E + Q TS + T + + LT +++
Sbjct: 201 YPWMKRVHLGQSTVNANGE--TKRQRTSYT-RYQTLELEKEFHFNRYLTRRRRIEIAHAL 257
Query: 464 PPSSGSVRLDLQNRPLRCQLPFRIRSI 544
+ +++ QNR ++ + ++ S+
Sbjct: 258 CLTERQIKIWFQNRRMKWKKEHKMASM 284
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.7
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSEICSMEQLTSVR*QSNTAFCSMMLYIKQRLTLTKKVLWQQLR 463
+PW R HL +S N E + Q TS + T + + LT +++
Sbjct: 201 YPWMKRVHLGQSTVNANGE--TKRQRTSYT-RYQTLELEKEFHFNRYLTRRRRIEIAHAL 257
Query: 464 PPSSGSVRLDLQNRPLRCQLPFRIRSI 544
+ +++ QNR ++ + ++ S+
Sbjct: 258 CLTERQIKIWFQNRRMKWKKEHKMASM 284
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.7
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSEICSMEQLTSVR*QSNTAFCSMMLYIKQRLTLTKKVLWQQLR 463
+PW R HL +S N E + Q TS + T + + LT +++
Sbjct: 201 YPWMKRVHLGQSTVNANGE--TKRQRTSYT-RYQTLELEKEFHFNRYLTRRRRIEIAHAL 257
Query: 464 PPSSGSVRLDLQNRPLRCQLPFRIRSI 544
+ +++ QNR ++ + ++ S+
Sbjct: 258 CLTERQIKIWFQNRRMKWKKEHKMASM 284
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 4.7
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSEICSMEQLTSVR*QSNTAFCSMMLYIKQRLTLTKKVLWQQLR 463
+PW R HL +S N E + Q TS + T + + LT +++
Sbjct: 157 YPWMKRVHLGQSTVNANGE--TKRQRTSYT-RYQTLELEKEFHFNRYLTRRRRIEIAHAL 213
Query: 464 PPSSGSVRLDLQNRPLRCQLPFRIRSI 544
+ +++ QNR ++ + ++ S+
Sbjct: 214 CLTERQIKIWFQNRRMKWKKEHKMASM 240
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.7
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSEICSMEQLTSVR*QSNTAFCSMMLYIKQRLTLTKKVLWQQLR 463
+PW R HL +S N E + Q TS + T + + LT +++
Sbjct: 201 YPWMKRVHLGQSTVNANGE--TKRQRTSYT-RYQTLELEKEFHFNRYLTRRRRIEIAHAL 257
Query: 464 PPSSGSVRLDLQNRPLRCQLPFRIRSI 544
+ +++ QNR ++ + ++ S+
Sbjct: 258 CLTERQIKIWFQNRRMKWKKEHKMASM 284
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.7
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSEICSMEQLTSVR*QSNTAFCSMMLYIKQRLTLTKKVLWQQLR 463
+PW R HL +S N E + Q TS + T + + LT +++
Sbjct: 201 YPWMKRVHLGQSTVNANGE--TKRQRTSYT-RYQTLELEKEFHFNRYLTRRRRIEIAHAL 257
Query: 464 PPSSGSVRLDLQNRPLRCQLPFRIRSI 544
+ +++ QNR ++ + ++ S+
Sbjct: 258 CLTERQIKIWFQNRRMKWKKEHKMASM 284
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 678 LICNLHTKNIRIKTVNAYTQ 619
L+ N++TKN+R T N TQ
Sbjct: 56 LVLNVYTKNLRTDT-NRITQ 74
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSE 340
+PW R HL +S N E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 284 FPWRGRYHLEKSWKNLGSE 340
+PW R HL +S N E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,870
Number of Sequences: 336
Number of extensions: 4448
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -