Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00484
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0012 - 7346282-7347136,7347234-7347593 53 3e-07
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 47 1e-05
01_01_1152 + 9170628-9171899 47 1e-05
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 47 2e-05
11_01_0771 + 6453130-6454488 46 3e-05
11_02_0011 - 7337618-7338496,7338596-7338991 46 4e-05
05_06_0044 - 25150322-25151260 41 0.001
01_06_0824 - 32243495-32244319,32244449-32244859 39 0.004
04_04_0619 + 26652923-26653267,26653440-26654273 35 0.063
11_01_0750 - 6315126-6315896,6316371-6316784 33 0.19
04_04_0620 + 26656072-26656417,26656585-26657396 33 0.19
11_01_0767 + 6438648-6438809,6439146-6440000 29 3.1
05_03_0452 + 14221741-14222382 29 3.1
02_05_1315 + 35675285-35676688,35676816-35677255,35677341-35678784 29 5.4
06_01_0570 + 4026889-4027537,4028340-4028689,4029258-4029433,402... 28 7.2
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 28 7.2
11_03_0140 - 10637818-10638059,10638189-10638461,10639963-106404... 28 9.5
10_08_0486 - 18239351-18239592,18240893-18240984,18241279-182413... 28 9.5
06_01_0953 + 7344095-7344444,7344978-7345049,7345136-7345208,734... 28 9.5
06_01_0835 - 6315762-6316844 28 9.5
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 268 VEIPKFSMERSLPLREILEKLGVGDLFN-GTADFSTLTEQHGILFDDAIHKAKIDVNEEG 444
+ +P+F + + E+L+ +G+G F+ G D S + + ++ + +H+A ++VNEEG
Sbjct: 290 LRVPRFKVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEG 349
Query: 445 TVAAAATA 468
T AAAATA
Sbjct: 350 TEAAAATA 357
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 483 FVSTCRTDP--FVANFPFVYVLYERPTSSILFMGVYRDP 593
F+ T P FVA+ PF + + E + ++LF G DP
Sbjct: 362 FLCLTLTSPVDFVADHPFAFFVVEEKSDAVLFAGHVLDP 400
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +1
Query: 271 EIPKFSMERSLPLREILEKLGVGDLFNGTADFSTLT---EQHGILFDDAIHKAKIDVNEE 441
++PKF + ++L+ LG+ F+ AD + + E + HK+ ++VNEE
Sbjct: 355 KLPKFKISFGFEASDLLKSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNEE 414
Query: 442 GTVAAAAT-AIFGFRSSRPAE 501
GT AAAAT A+ RS+ AE
Sbjct: 415 GTEAAAATAAVITLRSAPIAE 435
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 271 EIPKFSMERSLPLREILEKLGVGDLFNGTADFSTLTEQHGI--LFDDAI-HKAKIDVNEE 441
++PKF + +L+ LG+ LF D + + G LF ++ HK+ I+VNEE
Sbjct: 607 KLPKFKISFGFGASGLLKGLGLPLLFGSEVDLIEMVDSPGAQNLFVSSVFHKSFIEVNEE 666
Query: 442 GTVAAAATAIFGFRSSRP 495
GT A AA + SRP
Sbjct: 667 GTEATAAVMV-SMEHSRP 683
>01_01_1152 + 9170628-9171899
Length = 423
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 IPKFSMERSLPLREILEKLGVGDLFNGTADFSTL-TEQHGILFDDAIHKAKIDVNEEGTV 450
+PKF + + KLGV F G DFS + T G+ + H+A I+V+E GTV
Sbjct: 314 VPKFKFSFKFEAKSDMRKLGVTRAFAG-GDFSGMVTGGDGLFIAEVYHQATIEVDELGTV 372
Query: 451 AAAATAI 471
AAA+TA+
Sbjct: 373 AAASTAV 379
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 510 FVANFPFVYVLYERPTSSILFMGVYRDP 593
FVA+ PF++ + E T ++LF+G +P
Sbjct: 393 FVADRPFLFAVVEELTGAVLFLGHVVNP 420
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = +1
Query: 271 EIPKFSMERSLPLREILEKLGVGDLFNGTADFSTLT---EQHGILFDDAIHKAKIDVNEE 441
++PKF + ++L+ LG+ F+ AD + + E+H + HK+ + V+EE
Sbjct: 147 KLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEE 206
Query: 442 GTVAAAAT-AIFGFRSS 489
GT AAAA+ A+ FRS+
Sbjct: 207 GTEAAAASAAVVSFRSA 223
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 477 VPFVSTCRTDPFVANFPFVYVLYERPTSSILFMGVYRDP 593
V F S T FVA+ PF++++ E T +LF+G +P
Sbjct: 218 VSFRSAPVTVDFVADHPFLFLIREDMTGVVLFIGHVVNP 256
>11_01_0771 + 6453130-6454488
Length = 452
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +1
Query: 274 IPKFSMERSLPLREILEKLGVGDLFNGT-ADFSTLTEQHG----ILFDDAIHKAKIDVNE 438
+PKF + + LE+LG+ F+ AD S + E G + D HKA I+VNE
Sbjct: 338 VPKFKVSCGGSVVGALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNE 397
Query: 439 EGTVAAAATAIFGFRSSRPAEP 504
EGTVAAAAT S P P
Sbjct: 398 EGTVAAAATMTRMLPSGVPPPP 419
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 510 FVANFPFVYVLYERPTSSILFMGVYRDP 593
FVA PF Y + E +S+++F G DP
Sbjct: 422 FVAEHPFAYFIVEEMSSAVVFAGHIVDP 449
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Frame = +1
Query: 268 VEIPKFSMERSLPLREILEKLGVGDLFN-GTADFSTLTEQ-----HGILFDDAIHKAKID 429
+ +P+F + + +L+ +GV F+ G AD S + E G++ ++ H+A ++
Sbjct: 306 LRVPRFKVSFYSQINGVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVE 365
Query: 430 VNEEGTVAAAATA 468
VNEEGT AAA+TA
Sbjct: 366 VNEEGTEAAASTA 378
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 477 VPFVSTCRTDPFVANFPFVYVLYERPTSSILFMGVYRDP 593
+ +S + FVA+ PF + + E + ++LF G DP
Sbjct: 381 IRLLSMSYPEDFVADHPFAFFVVEETSGAVLFAGHVLDP 419
>05_06_0044 - 25150322-25151260
Length = 312
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 268 VEIPKFSMERSLPLREILEKLGVGDLFNGTADFS----TLTEQHGILFDDAIHKAKIDVN 435
++IPKF + + +L + G+ F AD S L G +H+ ++VN
Sbjct: 196 LKIPKFEVSLKVEASRLLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVN 255
Query: 436 EEGTVAAAATA--IFGF 480
EEGTVAAA T I GF
Sbjct: 256 EEGTVAAAGTVGEIMGF 272
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 274 IPKFSMERSLPLREILEKLGVGDLFNGT-ADFSTLTEQ----HGILFDDAIHKAKIDVNE 438
+P+F++ E L +LG+ F AD S + E I+ H++ ++VNE
Sbjct: 292 VPRFTLSYKTNAAETLRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVNE 351
Query: 439 EGTVAAAATAI 471
EGT AAAATA+
Sbjct: 352 EGTEAAAATAV 362
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 35.1 bits (77), Expect = 0.063
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = +1
Query: 274 IPKFSMERSLPLREILEKLGVGDLFNG-TADFSTL-----TEQHGILFDDAIHKAKIDVN 435
+PKF L R L KLG+G F+ AD S + T + K ++V+
Sbjct: 271 VPKFKFSSELDARGALAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVD 330
Query: 436 EEGTVAAAAT-AIFGFRSSRPAEPTP 510
EEGT A AT + S P P P
Sbjct: 331 EEGTTAVEATYSCCSPTYSGPESPKP 356
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 510 FVANFPFVYVLYERPTSSILFMGVYRDP 593
FVA PF++ + E + +LF+G DP
Sbjct: 361 FVAEHPFMFAIVEYEKAQVLFLGHVMDP 388
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 268 VEIPKFSMERSLPLREILEKLGVGDLFNGTADFSTLTEQ---HGILF-DDAIHKAKIDVN 435
+ +P F + + +++ L+ +G+ F A+FS + ++ G LF D +HKA ++V+
Sbjct: 282 ISVPNFKISFQIDVKDFLKDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVD 341
Query: 436 EEG 444
++G
Sbjct: 342 QKG 344
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 271 EIPKFSMERSLPLREILEKLGVGDLFN-GTADFSTL---TEQHGILFDDAIHKAKIDVNE 438
++PKF L L +LG+G F+ AD S + T G+ K ++V+E
Sbjct: 263 KVPKFKFSSQLDAGGALAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDE 322
Query: 439 EGTVAAAA 462
EGT A A
Sbjct: 323 EGTTAVEA 330
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 510 FVANFPFVYVLYERPTSSILFMGVYRDPKK 599
FVA PF++ + E + +LF+G DP K
Sbjct: 353 FVAEHPFMFAIVEYKKAQVLFLGHVMDPSK 382
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 379 EQHGILFDDAIHKAKIDVNEEGTVAAAAT 465
E + IHK ++VNEEG+ AAA T
Sbjct: 254 EDAAMFVSSVIHKVVVEVNEEGSEAAAYT 282
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 50 VPFMKQ-KGTFHYMVSDELGAQILELPYKGSDISMYILLPPYSM 178
VPFM++ G++H++ + G ++L LPYK + Y L YS+
Sbjct: 125 VPFMQRPSGSYHHVACHD-GFRVLRLPYKATS-DTYNLKLRYSL 166
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 510 FVANFPFVYVLYERPTSSILFMGVYRDPKK 599
FVA+ PF + + E + +I+F G DP +
Sbjct: 307 FVADHPFAFFIVEERSQAIVFAGHVLDPSE 336
>05_03_0452 + 14221741-14222382
Length = 213
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -1
Query: 470 MAVAAAATVPSSLTSIFALCIASSNRMPCCSVNVLKSAVPLNRSPTP 330
+AVAAA P+ T + AL +AS + P SVN AV R+P+P
Sbjct: 51 LAVAAARPRPADAT-VTALRLASLSVSPGGSVNATLDAVLAIRNPSP 96
>02_05_1315 + 35675285-35676688,35676816-35677255,35677341-35678784
Length = 1095
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 412 HKAKIDVNEEGTVAAAATAIFGFRSSRPAEPTPSLPTSLSYTFYTNVQP-VLFCSWAFT 585
H I G + +F S RPA+ S+P SY V P V+ SWA T
Sbjct: 631 HLMGIGEQPAGVTPSHPGPLFDVPSPRPAQDLKSMPDLASYIHLERVVPLVVKQSWALT 689
>06_01_0570 +
4026889-4027537,4028340-4028689,4029258-4029433,
4029593-4029659,4029746-4029780,4030084-4030186,
4031606-4031699,4031764-4031813,4031889-4032000,
4032275-4032401,4032491-4032941
Length = 737
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 392 MPCCSVNVLKSAVPLNRSPTPSFSRISLSGSDLSMENLGISTMTSLPYSSLLPQQP 225
+P + N +A+P PTP R SL L+ + + + + SL + LP P
Sbjct: 22 VPAAAANAALAALPFPSRPTPRLLRASLL-RRLAADPVSAAALDSLQLLASLPSSP 76
>03_01_0224 -
1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = -1
Query: 563 RTGWTFV*NVYEREVGNEGVGSAGRD---ERNPK-MAVAAAATVPSSLTSIFALCIASSN 396
R WT + + + VG RD +R PK V A++ +F CI
Sbjct: 83 RHAWTVLHMLKRKGFAAYLVGGCVRDLLLKRAPKDFDVITTASLQQIKKMVFQRCIIIGK 142
Query: 395 RMPCCSVNVLKSAVPLNRSPT 333
R P C VN+ + + ++ T
Sbjct: 143 RFPICQVNMYGTKIEVSSFST 163
>11_03_0140 -
10637818-10638059,10638189-10638461,10639963-10640473,
10640556-10640768,10642717-10642784,10642893-10642958,
10644862-10644961
Length = 490
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 409 IHKAKIDVNEEGTVAAAATAIFGFRSSRPAEPTP-SLPT 522
I KA ++ +GT AA TA R + P TP +LPT
Sbjct: 68 IEKAWATLHLQGTAAAFLTASLASRMTEPVNTTPTTLPT 106
>10_08_0486 -
18239351-18239592,18240893-18240984,18241279-18241364,
18241442-18241643,18241743-18241960,18242524-18242640
Length = 318
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 133 FVRKLQNLCAEFIAHHIMESSFLFHERNKSLSGFRNEES 17
+ R +++L A F+ +H + SSF + +G RN+E+
Sbjct: 216 YQRNVKDLSACFLTYHTISSSFQDYALESMANGKRNDET 254
>06_01_0953 +
7344095-7344444,7344978-7345049,7345136-7345208,
7345323-7345347,7345882-7345921,7346201-7346270,
7346475-7346558
Length = 237
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = -1
Query: 503 GSAGRDERNPKMAVAAAATVPSSLTSIFALCIASSNRMPCCSVNVLKSAVPLNRSPTPSF 324
GS+GR+ER A+ A SL+ + A A+ + N + +P N S +
Sbjct: 82 GSSGREERTEAAALTGANHDGRSLSPVSA---AADGEWTNLADNNFQGPIPANISSCTAL 138
Query: 323 SRISLSGSDLS 291
++ ++ G++L+
Sbjct: 139 NKFNVYGNELN 149
>06_01_0835 - 6315762-6316844
Length = 360
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 410 IASSNRMPCCSVNVLKSAVPLNRSPTPSFSRISLSGSDLSMENLGISTMTSLP--YSSLL 237
++SS+ ++K+ P RS +P+ + S + L + IST T+ P YSS L
Sbjct: 11 LSSSSSSSSSDQELMKALEPFIRSASPTSTSTS---TPLFYSSSSISTTTTTPFSYSSPL 67
Query: 236 PQQ 228
PQ+
Sbjct: 68 PQE 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,430,818
Number of Sequences: 37544
Number of extensions: 464788
Number of successful extensions: 1499
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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