Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00484
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 27 0.26
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 27 0.26
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 26 0.45
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 2.4
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 4.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 4.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.5
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 22 7.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 7.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 7.3
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 26.6 bits (56), Expect = 0.26
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 554 WTFV*NVY-EREVGNEGVGSAGRDERNPKMAVAAAATVPSS 435
W++V VY E G G+ R+ + +AAA VPS+
Sbjct: 138 WSYVSTVYSEGSYGEYGIEVFTREATERNVCIAAAVKVPSA 178
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 26.6 bits (56), Expect = 0.26
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 554 WTFV*NVY-EREVGNEGVGSAGRDERNPKMAVAAAATVPSS 435
W++V VY E G G+ R+ + +AAA VPS+
Sbjct: 228 WSYVSTVYSEGSYGEYGIEVFTREATERNVCIAAAVKVPSA 268
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.8 bits (54), Expect = 0.45
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 359 LTSVR*QSNTAFCSMMLYIKQRLTLTKKV 445
LTS+ +SNT F +++ ++KQ+ K+
Sbjct: 329 LTSISVESNTMFINILKFLKQKYVKNSKL 357
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 471 DGGRSCCHSTFFVNVNLCFMYSIIEQNAVLLCQRT 367
DG R+C + F V + +I+ + V +C++T
Sbjct: 439 DGPRNCIGARFAVYQTKVGLITILRNHKVEVCEKT 473
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 22.6 bits (46), Expect = 4.2
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = -1
Query: 461 AAAATVPSSLTSIFALCIASSNRMPCCSVNVLKSAVPLNRSPTPSFSRISLSGSDLSMEN 282
A T+ + TS + SS + + A N SP+P+ S SGS S
Sbjct: 22 ANPGTIQACTTSPATASLESSLSAAAVAAAAVNYAQQHN-SPSPTGSSPQHSGSSASTSP 80
Query: 281 LGISTMTSLPYSS 243
+T + PY S
Sbjct: 81 AARTTSSMYPYVS 93
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.6 bits (46), Expect = 4.2
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -3
Query: 420 CFMYSIIEQNAVLLCQRTEVSCSIEQISDP 331
C++ N + +C +V+ +I +++DP
Sbjct: 121 CWLQMTKHHNFIKVCSVNDVNMTITELTDP 150
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 131 KGSDISMYILLPPYSMKE 184
KG + + LPP SMKE
Sbjct: 519 KGETVGLLNALPPSSMKE 536
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 574 MNKIELVGRSYRTYTKGKLATKGSVLQVETN 482
+++ +L+G YR T + + SVLQV N
Sbjct: 209 LSQFDLMGSPYRNLTFVRREGEFSVLQVSFN 239
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 346 FNGTADFSTLTEQHGILFDDAIHKAKIDVNEEGTVA 453
++ D T + + +D +H+ + VN+E VA
Sbjct: 100 YHDDEDLKTFFHKIALTCEDDVHRKFLHVNDECDVA 135
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 541 YTNVQPVLFCSWAFTGILRSIDCLMCLCVCVNSFNSNIFCV 663
+TN+ ++ +WA +L S+ + C N +N+ +C+
Sbjct: 110 WTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTR-YCL 149
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 541 YTNVQPVLFCSWAFTGILRSIDCLMCLCVCVNSFNSNIFCV 663
+TN+ ++ +WA +L S+ + C N +N+ +C+
Sbjct: 163 WTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTR-YCL 202
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,746
Number of Sequences: 438
Number of extensions: 4869
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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