Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00483
(722 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 58 2e-09
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 58 2e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 56 4e-09
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 52 6e-08
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 50 3e-07
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 48 1e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 47 2e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 46 5e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 44 2e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 43 4e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 9e-05
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 38 0.001
SPAC25B8.15c |||wybutosine biosynthesis protein Tyw3|Schizosacch... 32 0.095
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 31 0.22
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 30 0.29
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 29 0.89
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 1.2
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 28 1.6
SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|c... 28 1.6
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.1
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 27 2.1
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 26 4.7
SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr 1|||M... 26 4.7
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 6.3
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 26 6.3
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 26 6.3
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 8.3
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 57.6 bits (133), Expect = 2e-09
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +3
Query: 255 ERPYSCDI--CGKAFRRQDHLRDHRYIHSKEKPFKC--TECGKGFCQSRTLAVHKILHME 422
ERP+ CD C KAF R+ HL+ H+ H+ KPF C C F + L H +H +
Sbjct: 50 ERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRK 109
Query: 423 ESPHKC--PVCSRSFNQRSNLKTHL 491
P+ C C F++ L++H+
Sbjct: 110 PKPYACTWEGCDECFSKHQQLRSHI 134
Score = 54.4 bits (125), Expect = 2e-08
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 279 CGKAFRRQDHLRDHRYIHSKEKPFKC--TECGKGFCQSRTLAVHKILHMEESPHKCPV-- 446
CGK + R L H HS E+PF C T C K F + L +HK H P C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 447 CSRSFNQRSNLKTHLLTH 500
C F + +L+ H+ H
Sbjct: 90 CDAQFYTQQHLERHIEVH 107
Score = 47.6 bits (108), Expect = 2e-06
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +3
Query: 267 SCDICGKAFRRQDHLRDHRYIH----SKEKPFKC--TECGKGFCQSRTLAVH-KILHMEE 425
SC ICG+ F+ HLR H +H + K + C C K F +S L H ++H
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 426 SPHKCPVCSRSFNQRSNLKTHL 491
C C F + L+ HL
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHL 286
Score = 43.2 bits (97), Expect = 4e-05
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 315 DHRYIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHMEESPHKCPV--CSRSFNQRSNLK 482
+ + + S +K F C ECGK + + L H H E P C CS++F ++S+LK
Sbjct: 12 ESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLK 71
Query: 483 THLLTHTD 506
H HT+
Sbjct: 72 IHKRCHTN 79
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +3
Query: 261 PYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHM----EES 428
P+ + + F + L++H I P C+ CG+ F + L H +LH E
Sbjct: 178 PHESCVGHEGFEKWSQLQNH--IREAHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERK 234
Query: 429 PHKCPV--CSRSFNQRSNLKTHLLTHTDQNLMNAIHVGKC 542
+ CP+ C +SF + S LK H+ + N+ A H C
Sbjct: 235 TYHCPMEGCKKSFTRSSALKKHISVIHEGNM--AFHCDSC 272
Score = 31.1 bits (67), Expect = 0.17
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 130 RP*LLRAPGRASRPKKQFICKF--CNRQFTKSYNLLIHERTHT 252
RP LL R ++ F+C + C++ F + +L IH+R HT
Sbjct: 36 RPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHT 78
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 57.6 bits (133), Expect = 2e-09
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 222 QPTHPRENPYRERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCT--ECGKGFCQSRTL 395
+P+ +NP RPY C +C KAF R +H H H+ EKP CT C K F +S L
Sbjct: 12 KPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDEL 71
Query: 396 AVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDQNLMNA-IHVGKCS 545
H +H + + + + N + + + + NA +H+ S
Sbjct: 72 TRHARIHTNANSRRNAAAAAAANNSARSSNSPAGNLEPSTNNAGVHMTNAS 122
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 494 NTHRPKPYECNSCGKVFRRNCDLRRHALTH 583
N P+PY+C C K F R RH TH
Sbjct: 19 NPDAPRPYKCPLCTKAFYRLEHQTRHIRTH 48
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 470 IQFEDTSINTHR-PKPYECN--SCGKVFRRNCDLRRHALTH 583
++ + I TH KP+ C C K F R+ +L RHA H
Sbjct: 38 LEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 157 RASRPKKQFICKF--CNRQFTKSYNLLIHERTHT--ESGRIPVISAERHSEDKTTYETIG 324
R +K +C F C ++F++S L H R HT S R +A ++ +++ G
Sbjct: 46 RTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRRNAAAAAAANNSARSSNSPAG 105
Query: 325 TYTPKRSLSNA 357
P S +NA
Sbjct: 106 NLEP--STNNA 114
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 56.4 bits (130), Expect = 4e-09
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 RPYSCDICGKAFRRQDHLRDH-RYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESP 431
+ + C C K F+R +HLR H R +H+ EKPF C CGK F + L H+ LH+ SP
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASP 478
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 342 KPFKCTECGKGFCQSRTLAVH-KILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTD 506
K F C EC K F +S L H + LH E P C +C + F++R NL+ H H +
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVN 475
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 231 HPRENPYRERPYSCDICGKAFRRQDHLRDHRYIHSKEKP 347
H R E+P+ C ICGK F R+D+LR H +H P
Sbjct: 441 HIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 31.5 bits (68), Expect = 0.13
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 509 KPYECNSCGKVFRRNCDLRRHALTHA-XXXXXXXXXXXXXEEDIGRPGSPIEPGYDDEDA 685
KP+ C CGK F R +LR+H H G PG+P++P ED
Sbjct: 450 KPFVC-ICGKRFSRRDNLRQHERLHVNASPRLACFFQPSGYYSSGAPGAPVQPQKPIEDL 508
Query: 686 EISSLN 703
+N
Sbjct: 509 NKIPIN 514
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 175 KQFICKFCNRQFTKSYNLLIHERT-HTESGRIPVISAERHS 294
K F+C C+++F +S +L H R+ HT I +R S
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFS 461
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 395 GRSQNSTH-----GRVTTQMSSLQQKLQPTIQFEDTSINTHRPKPYECNSCGKVFRRNCD 559
GRS NS G + T S ++K + + + + K + C C K F+R+
Sbjct: 378 GRSPNSMEATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEH 437
Query: 560 LRRH 571
LRRH
Sbjct: 438 LRRH 441
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 438 CPVCSRSFNQRSNLKTHLLT-HTDQ 509
CP CS+ F + +L+ H+ + HT +
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSE 449
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 52.4 bits (120), Expect = 6e-08
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +3
Query: 279 CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRS 458
C K F R +L+ H H+ +PF+C+ C K F + H+ LH C C++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 459 FNQRSNLKTHLLTHTDQNLM 518
F + L H + QN +
Sbjct: 637 FARMDALNRHYKSEVGQNCL 656
Score = 46.0 bits (104), Expect = 5e-06
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 258 RPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVH 404
RP+ C IC K+F RQ R H +H+ K F C C + F + L H
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 163 SRPKKQFICKF--CNRQFTKSYNLLIHERTHT 252
S+ + ++C F CN++FT++YNL H THT
Sbjct: 564 SKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHT 595
Score = 33.5 bits (73), Expect = 0.031
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 398 RSQNSTHGRVTTQMSSLQQKLQPTIQFEDTSINTHRP-KPYECNSCGKVFRRNCDLRRHA 574
+S++ + G + ++ + + +NTH +P++C+ C K F R D RRH
Sbjct: 561 KSESKSQGNYVCTFAGCNKRFTRAYNLK-SHMNTHTNYRPFQCSICKKSFARQHDKRRHE 619
Query: 575 LTH 583
H
Sbjct: 620 QLH 622
Score = 25.8 bits (54), Expect = 6.3
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 175 KQFICKFCNRQFTKSYNLLIHERTHT 252
+ F C C + F + ++ HE+ HT
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHT 623
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 50.0 bits (114), Expect = 3e-07
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +3
Query: 234 PRENPYRERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTE-------CGKGFCQSRT 392
P P + + Y C+ C +AF R +HL+ H H+ EKPF C+E CG+ F +
Sbjct: 60 PNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDL 119
Query: 393 LAVH-KILHMEESPHK 437
L H + +H P +
Sbjct: 120 LLRHQQKIHRNPQPRR 135
Score = 31.1 bits (67), Expect = 0.17
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 151 PGRASRPKKQFICKFCNRQFTKSYNLLIHERTHT 252
P + KQ++C+ C R F + +L H R+HT
Sbjct: 60 PNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHT 93
Score = 30.3 bits (65), Expect = 0.29
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 389 DVGRSQNSTHGRVTTQMSSLQQKLQPTIQFEDTSINTHRPKPYECNSCGKVFRRNCDLRR 568
D G S +T VT+ + T +D + + K Y C +C + F R L+R
Sbjct: 31 DSGTSNANTPSSVTSNSKPVASS---TAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKR 87
Query: 569 HALTH 583
H +H
Sbjct: 88 HIRSH 92
Score = 28.7 bits (61), Expect = 0.89
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 438 CPVCSRSFNQRSNLKTHLLTHTDQ 509
C C+R+F + +LK H+ +HT++
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNE 95
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 348 FKCTECGKGFCQSRTLAVHKILHMEESPHKCPV--CSRSFNQRSNLKTHLLTH 500
++CTEC +GF + +L +H H E P C C ++FN RSN++ H H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 264 YSCDICGKAFRRQDHLRDHRYIHSKEKPFKC--TECGKGFCQSRTLAVHKILH 416
Y C C + F R L+ H Y H+ E+PF C CGK F + H+ +H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 432 HKCPVCSRSFNQRSNLKTHLLTHTDQ 509
++C C + F++ S+LK H +HT +
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGE 493
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +2
Query: 509 KPYECN--SCGKVFRRNCDLRRHALTH 583
+P+ C+ CGK F ++RRH H
Sbjct: 494 RPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 47.2 bits (107), Expect = 2e-06
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 279 CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVH-KILHMEESPHKCPVCSR 455
C K+F R++HLR H H K F C+ C + F +S L H + +H+++ R
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLS---ERR 89
Query: 456 SFNQRSNLKTHLLTHTDQNLMNAIH 530
N L +L H NL+NA H
Sbjct: 90 MLNASCFLGFCVLAHDYVNLINARH 114
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 348 FKCT--ECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHL 491
F CT +C K F + L H+ H C C+R+F + L H+
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHV 75
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 142 LRAPGRASRPKKQFICKFCNRQFTKS 219
LR R K F C FCNR F +S
Sbjct: 43 LRRHERTHENVKAFSCSFCNRAFARS 68
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +3
Query: 258 RPYSCDICGKAFRRQDHLRDH-RYIHSK-----EKPFKCTECGKGFC 380
+ +SC C +AF R D L H + +H + E+ C GFC
Sbjct: 54 KAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSERRMLNASCFLGFC 100
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 142 LRAPGRASR-PKKQFICKF--CNRQFTKSYNLLIHERTH 249
L+ RA R +F C + C + FT+ +L HERTH
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTH 50
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 46.0 bits (104), Expect = 5e-06
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 246 PYRERPYSC--DICGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHM 419
P + Y C + C K R+ ++ H H ++P++C C GF + L H +H
Sbjct: 437 PEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHE 496
Query: 420 EESPHKCPVCSRSFNQRSNLKTH 488
P+ C C + FN+ L H
Sbjct: 497 NGRPYVCE-CLKRFNRLDALNRH 518
Score = 35.5 bits (78), Expect = 0.008
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 363 CGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTH 500
C K + + H H+ + P++C +C F + +LK HL H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 482 DTSINTH-RPKPYECNSCGKVFRRNCDLRRHALTH 583
++ I TH +PY C+ C F R+ DL+RH H
Sbjct: 461 ESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 258 RPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHMEES 428
+ Y C C + F RQ+H H H+ EKPF+C+ C K F + L H H+ ++
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
Score = 35.1 bits (77), Expect = 0.010
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 342 KPFKCTECGKGFCQSRTLAVHKILHMEESPHKC--PVCSRSFNQRSNLKTHLLTHTDQNL 515
K ++C C + F + H H E P +C P C + F +R L H+ TH + L
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKAL 61
Query: 516 M 518
+
Sbjct: 62 V 62
Score = 29.9 bits (64), Expect = 0.38
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +2
Query: 509 KPYECN--SCGKVFRRNCDLRRHALTH 583
KP+EC+ SC K F R +L RH TH
Sbjct: 30 KPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 157 RASRPKKQFICKF--CNRQFTKSYNLLIHERTH 249
R+ +K F C + C ++FT+ L+ H RTH
Sbjct: 24 RSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 175 KQFICKFCNRQFTKSYNLLIHERTHT 252
K + C FC R F + + + H R+HT
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHT 27
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 509 KPYECNSCGKVFRRNCDLRRHALTH 583
K YEC C +VF R RH +H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSH 26
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 43.2 bits (97), Expect = 4e-05
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 309 LRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTH 488
L + I SK + F C +C K F + L HK H + P CP C ++ LK H
Sbjct: 19 LTEPSLIDSK-RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Query: 489 LLT-HTDQNLM 518
+ H D++++
Sbjct: 78 IQRFHNDKSVI 88
Score = 40.3 bits (90), Expect = 3e-04
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 255 ERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTEC 365
+R + CD C K F R ++L H+ HSK +P C C
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYC 64
Score = 29.9 bits (64), Expect = 0.38
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 172 KKQFICKFCNRQFTKSYNLLIHERTHTESGRIP 270
K+ F C C ++FT+ NL H+ H+++ IP
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIP 60
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 515 YECNSCGKVFRRNCDLRRHALTHA 586
+ C+ C K F R+ +L RH H+
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHS 54
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 41.9 bits (94), Expect = 9e-05
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 264 YSCDI--CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVH 404
Y CD C K+F R++H R H H+ K F C C F +S L H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 29.1 bits (62), Expect = 0.67
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 348 FKCT--ECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHL-LTHTDQN 512
+KC C K F + H H CP CS SF + L H+ H QN
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQN 74
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 ERPYSCDI--CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEES 428
++PY C + C KA++ Q+ L+ H+ +H C + H+ +E
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHK-LHG--------HCSPITTPTPAPIPHQGFVVENK 397
Query: 429 PHKCPVCSRSFNQRSNLKTHLLTHT 503
P++C VCS+ + + LK H TH+
Sbjct: 398 PYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPAC25B8.15c |||wybutosine biosynthesis protein
Tyw3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 237
Score = 31.9 bits (69), Expect = 0.095
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 238 ERTHTESGRIPVISAERHSEDKTTYETIGTYTPKRSLSNAQNVAKVFASRG 390
E E G++P E + E + +E + + RSL+NAQ++ +V AS G
Sbjct: 93 EDEKVEYGKVPSSPVEGNREIQYAFEPMILHVQTRSLANAQHLQRVAASCG 143
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 30.7 bits (66), Expect = 0.22
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 157 RASRPKKQFICKFCNRQFTKSYNLLIHERT 246
+A RP IC CN F S L++HE T
Sbjct: 167 KALRPTPNLICSKCNTTFNHSTALMMHEAT 196
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 30.3 bits (65), Expect = 0.29
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 363 CGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHL 491
CG GFC + K +E +CP+C R F + HL
Sbjct: 643 CGHGFCYQ---CIQK--RIETRQRRCPICGRGFGASDVIPIHL 680
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.7 bits (61), Expect = 0.89
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 148 APGRASRPKKQFICKFCNRQFTKSYNLLIHERTHTESGRIPVISAERH 291
A + + P F C C+ F K L H+RT+ + + +I R+
Sbjct: 128 ASKQPNMPNATFRCDKCDMMFVKQSGLTNHKRTYHQVETVVIIGHRRY 175
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 178 QFICKFCNRQFTKSYNLLIHERTHTESGRIPVISAERHSEDKTTYET 318
Q C+ C R K L E H+ IP SAE +S +T +T
Sbjct: 671 QHACQLCQRSLDKEEEKLFVEHCHSMIDVIPSKSAEVYSHLETLTKT 717
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 49 SDSCWKLYISWSGSIPT*CRAAPDPSVRP*LLRAPGRASRPKKQFICKFCNRQFTKSYNL 228
SD WK SW S+PT A P P +R K+ F+ + + + + S+
Sbjct: 253 SDDSWKAPESWGTSLPT--EAIPKQVFTTRFFARPSLGNRKKEFFLRVYRDDRTSVSFIC 310
Query: 229 LIHERTH 249
I +TH
Sbjct: 311 PIGIQTH 317
>SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 124
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 178 QFICKFCNRQFTKSYNLLIHERTHTESGRIPVISAERHSEDKTTYETIGTYTPKRSLSN 354
Q C C R F S LL+H++ R+ + E +++++ + PK+S+++
Sbjct: 55 QHYCIECARYFDSSQALLVHKKGKVHKRRLKNLREEPYTQEEAE-AAVNIGQPKQSVAS 112
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = +3
Query: 369 KGFCQSRTLAV--HKILHMEESPHKC--PVCSRSFNQRSNLKTHLLT 497
KG Q+ A+ H H E P C P C RSF + L H+ T
Sbjct: 83 KGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 157 RASRPKKQFICKF--CNRQFTKSYNLLIHERTHTES 258
R+ +K FIC C+R FT+S L H RT E+
Sbjct: 98 RSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEA 133
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 324 YIHSKEKPFKCTECGKGFC--QSRTLAVHKILHMEESPHK 437
+I + KC C K FC + ++ A H I H+ + HK
Sbjct: 48 HIKNPNSILKCLHCNKWFCNVRGKSGASHIISHLVRARHK 87
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 286 RHSEDKTTYETIGTYTPKRSLSNAQNVAKVFASRGR 393
+HSED++++ I + R+ ++A+N + RGR
Sbjct: 86 QHSEDESSFSVIDRGSVNRTRTSARNGGTLLKVRGR 121
>SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 538 FPT*IAFIRFWSVCVNRCVFKL 473
+PT AF+ FWS C+ + V L
Sbjct: 71 YPTRYAFLVFWSFCIVQAVMYL 92
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 394 WPFTKFYTWKSHHTNVQFAAE 456
W + Y WK HH VQ+ +E
Sbjct: 908 WSQSSRYGWKGHHIMVQYWSE 928
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 6.3
Identities = 21/95 (22%), Positives = 38/95 (40%)
Frame = +2
Query: 299 TRPLTRPSVHTLQREAFQMHRMWQRFLPVEDVGRSQNSTHGRVTTQMSSLQQKLQPTIQF 478
T P+ PS + + + R + P+++ S + + T + +P +
Sbjct: 320 TLPIECPSCSLVLILSTHLARSYHHLFPLKNWSEIPWSANPKSTHCFACQLPFPKPPVSP 379
Query: 479 EDTSINTHRPKPYECNSCGKVFRRNCDLRRHALTH 583
D S ++ R Y C SC F +CD+ H H
Sbjct: 380 FDESTSSMR---YACPSCKNHFCLDCDVFAHEQLH 411
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 159 SFAAEETIHL*ILQPTIYEILQPTHPREN 245
SF +E HL L P IY I P+H R+N
Sbjct: 613 SFHTKE--HLQSLHPNIYVIRSPSHFRQN 639
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 207 IYEILQPTHPR-ENPYRERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECG 368
++++++ R N + + Y C C K F D L + + E F C CG
Sbjct: 116 MHQLVKTVEDRMRNDFDSKGYVCPFCNKKFSSLDVLS----LVTNEGTFACNVCG 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,088,320
Number of Sequences: 5004
Number of extensions: 67568
Number of successful extensions: 316
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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