Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00479
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.6  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   6.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.3  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   8.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.3  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 358 DLME-RYIEQCVFKYLRAEPEDH 423
           DL E +Y+E+CV + LR  P  H
Sbjct: 357 DLQEMKYLERCVKEVLRLYPSVH 379


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 358 DLME-RYIEQCVFKYLRAEPEDH 423
           DL E +Y+E+CV + LR  P  H
Sbjct: 357 DLQEMKYLERCVKEVLRLYPSVH 379


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 370 RYIEQCVFKYLRAEPEDHHFLMT 438
           +Y+E+C+ + LR  P  H    T
Sbjct: 46  KYLERCIKETLRLYPSVHFISRT 68


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 99  KWETIYQLVLSMSAPGILNWVLP 167
           KWE +   +  +  PG+ +W  P
Sbjct: 52  KWEDVMADIERVIMPGVTHWHSP 74


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 174 LLPAKPSLVYPVPTSITQAGKWSPIFII*SLLFNYIDIK 58
           L+  K   ++P PTS+T+       F   S+ FN  D K
Sbjct: 63  LVCGKYGALWPQPTSVTKISSTLLKFPYRSIKFNIPDEK 101


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 691 LPAIGMCFIHDPITYPSAT-GTM*VTPS 611
           +P+ G+C  HD I   S+T G    TPS
Sbjct: 106 MPSAGLCGSHDEIPDISSTRGNNNNTPS 133


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 370 RYIEQCVFKYLRAEPEDH 423
           +Y+E+C+ + LR  P  H
Sbjct: 46  KYLERCIKESLRLYPSVH 63


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 691 LPAIGMCFIHDPITYPSAT-GTM*VTPS 611
           +P+ G+C  HD I   S+T G    TPS
Sbjct: 54  MPSAGLCGSHDEIPDISSTRGNNNNTPS 81


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 691 LPAIGMCFIHDPITYPSAT-GTM*VTPS 611
           +P+ G+C  HD I   S+T G    TPS
Sbjct: 237 MPSAGLCGSHDEIPDISSTRGNNNNTPS 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,582
Number of Sequences: 336
Number of extensions: 3797
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)