Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00479
(778 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 83 9e-18
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 83 9e-18
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 83 9e-18
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 80 9e-17
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 8.0
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 8.0
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 83.0 bits (196), Expect = 9e-18
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 68.5 bits (160), Expect = 2e-13
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 33.5 bits (73), Expect = 0.007
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
+ + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 83.0 bits (196), Expect = 9e-18
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 68.5 bits (160), Expect = 2e-13
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 33.5 bits (73), Expect = 0.007
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
+ + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 83.0 bits (196), Expect = 9e-18
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 68.5 bits (160), Expect = 2e-13
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 33.5 bits (73), Expect = 0.007
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
+ + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 79.8 bits (188), Expect = 9e-17
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGI+ +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+F A
Sbjct: 112 NPKSNREKMTQIMFETFAAPA 132
Score = 67.3 bits (157), Expect = 5e-13
Identities = 32/73 (43%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGV+H VP+ EGY + I + +AGR
Sbjct: 133 VYVAIQAVLSLYASGRT--------TGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 33.5 bits (73), Expect = 0.007
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 23.4 bits (48), Expect = 8.0
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
Frame = +2
Query: 578 THLHWHRSRQRRWRY----SHCSSC 640
T +HWH QRR Y H S C
Sbjct: 376 TTIHWHGLHQRRTPYMDGVPHVSQC 400
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 8.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 102 WETIYQLVLSMSAP 143
WE +YQLVL + P
Sbjct: 388 WENLYQLVLRSAGP 401
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,446
Number of Sequences: 2352
Number of extensions: 16655
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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