Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00479
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 158 5e-39
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 83 2e-16
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 83 2e-16
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 83 2e-16
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 83 2e-16
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 83 2e-16
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 83 2e-16
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 83 2e-16
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 83 2e-16
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 73 2e-13
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 56 2e-08
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 41 0.001
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 41 0.001
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 41 0.001
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 39 0.005
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 38 0.008
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 2.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 2.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 2.1
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical ... 28 8.6
AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical ... 28 8.6
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 158 bits (383), Expect = 5e-39
Identities = 70/84 (83%), Positives = 76/84 (90%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 VEDLDFFIGDEAFE--ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLM 435
++DLDFFIGDEA AT Y+VKYP+RHGIVEDWDLMERY EQC+FKYLRAEPEDH FL+
Sbjct: 60 IDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLL 119
Query: 436 TEPPLNTPENREYLAEIMFESFNV 507
TEPPLNTPENREY AEIMFESFNV
Sbjct: 120 TEPPLNTPENREYTAEIMFESFNV 143
Score = 136 bits (329), Expect = 2e-32
Identities = 64/82 (78%), Positives = 72/82 (87%)
Frame = +3
Query: 510 GLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAG 689
GLYIAVQAVLAL ASW SR + ER+ TG+V+DSGDGVTH +PVA+GYVIGSCIKHIPIAG
Sbjct: 145 GLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAG 204
Query: 690 RNITSFIQSLLREREVGIPPEQ 755
R+IT FIQSLLR+RE IP EQ
Sbjct: 205 RDITYFIQSLLRDREHTIPAEQ 226
Score = 68.5 bits (160), Expect = 5e-12
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +2
Query: 113 LPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRM 253
LPACVID GTGYTKLG+AGN EPQFIIPS IA+K+ KV +++ M
Sbjct: 6 LPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKD--KVASSNSQAM 50
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 51 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 110
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 111 NPKSNREKMTQIMFETFNTPA 131
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/73 (43%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+ +QAVL+L AS ++ TGIV+D+GDGVTH VP+ EGY + I+ + +AGR
Sbjct: 132 MYVNIQAVLSLYASGRT--------TGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGR 183
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 184 DLTDYMMKILTER 196
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 101 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
M + + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 35
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A ++D G+G K GFAG+ P+ + PS +
Sbjct: 4 DDVAALILDNGSGMCKAGFAGDDAPRAVFPSIV 36
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 67
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 68 NPKANREKMTQIMFETFNTPA 88
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 89 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 140
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 141 DLTDYLMKILTER 153
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 38 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 97
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 98 NPKANREKMTQIMFETFNTPA 118
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 119 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 170
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 171 DLTDYLMKILTER 183
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 450
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 451 NTPENREYLAEIMFESFNVQA 513
N NRE + +IMFE+FN A
Sbjct: 112 NPKANREKMTQIMFETFNTPA 132
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AGR
Sbjct: 133 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 693 NITSFIQSLLRER 731
++T ++ +L ER
Sbjct: 185 DLTDYLMKILTER 197
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +1
Query: 268 DLDFFIGDEAFEATG-YSVKYPVRHGIVEDWDLMERYIEQCVFK-YLRAEPEDHHFLMTE 441
D D FIG +A G +S++YP+ HGIV +W ME+ E + L+ PE+H L+T+
Sbjct: 52 DGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTD 111
Query: 442 PPLNTPENREYLAEIMFESFNVQA 513
PLN +NRE AEI FE+FNV A
Sbjct: 112 APLNPLKNRERSAEIFFETFNVPA 135
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/71 (43%), Positives = 50/71 (70%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
LYI +QAVL+L A+ ++ TG+V+DSGDGVTH VP+ +G+ + I+ + +AGR
Sbjct: 136 LYIQMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGR 187
Query: 693 NITSFIQSLLR 725
++T +++ LLR
Sbjct: 188 DVTEYLRVLLR 198
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 125 VIDVGTGYTKLGFAGNKEPQ 184
VID G+G K GFAG ++P+
Sbjct: 12 VIDNGSGVIKAGFAGEQQPK 31
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3
Query: 513 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGR 692
+Y+AVQAVL L A + TG+VVDSGDGVTHI PV EG+ + + + IAGR
Sbjct: 136 IYVAVQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGR 187
Query: 693 NITSFIQSLLRER 731
+IT ++ LL +R
Sbjct: 188 DITKYLIKLLLQR 200
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Frame = +1
Query: 262 VEDLDFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVF-KYLRAEPEDHHFLM 435
+E D +G+E + + YP+ +GIV +WD M + + L +P++ L+
Sbjct: 50 IEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLL 109
Query: 436 TEPPLNTPENREYLAEIMFESFN-------VQAFTLLYKPFLL 543
TEPPLN NRE + ++MFE + VQA LY LL
Sbjct: 110 TEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLL 152
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 125 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGD 235
V+D GTG+ K G+AG P I PS + ++ T +VG+
Sbjct: 10 VVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGN 49
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 331 VRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVQ 510
++ G++EDW+L E+ +E L + P +H L +E N RE L EIMFE F V
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 511 AFTL 522
A+ L
Sbjct: 154 AYYL 157
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 591 GIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPP 749
G++VDSG T +VPV +GY + + PI G IT + +L ++++ + P
Sbjct: 173 GLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIP 225
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 104 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKE 217
GD + V D G+ ++GFAG + P+ IPS IA++E
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQE 45
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMER 372
D ++GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMER 372
D ++GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMER 372
D ++GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 588 TGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGI 743
TG+VVD G+ V +IVPV +GYV+ S I IP + + +++ L G+
Sbjct: 322 TGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGL 372
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 274 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLM 366
D ++GDEA G ++KYP+ HGIV +WD M
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTI 205
D + A V+D G+G K GFAG+ P+ + PS +
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 36
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 229 WRSEYSEDDKAVED---LDFFIGDEAFEA---TGYSVKYPVRHGIVEDWDLMERYIEQCV 390
W ++Y +D ED + F + E F GY+V P++ I+ D D+ + + + +
Sbjct: 852 WHNQYEAEDAHTEDQKPVRFAVDPEQFADFSWRGYAVFSPIQDKILIDVDITKATVYRLL 911
Query: 391 FKY 399
F+Y
Sbjct: 912 FRY 914
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 229 WRSEYSEDDKAVED---LDFFIGDEAFEA---TGYSVKYPVRHGIVEDWDLMERYIEQCV 390
W ++Y +D ED + F + E F GY+V P++ I+ D D+ + + + +
Sbjct: 852 WHNQYEAEDAHTEDQKPVRFAVDPEQFADFSWRGYAVFSPIQDKILIDVDITKATVYRLL 911
Query: 391 FKY 399
F+Y
Sbjct: 912 FRY 914
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 229 WRSEYSEDDKAVED---LDFFIGDEAFEA---TGYSVKYPVRHGIVEDWDLMERYIEQCV 390
W ++Y +D ED + F + E F GY+V P++ I+ D D+ + + + +
Sbjct: 852 WHNQYEAEDAHTEDQKPVRFAVDPEQFADFSWRGYAVFSPIQDKILIDVDITKATVYRLL 911
Query: 391 FKY 399
F+Y
Sbjct: 912 FRY 914
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 229 WRSEYSEDDKAVED---LDFFIGDEAFEA---TGYSVKYPVRHGIVEDWDLMERYIEQCV 390
W ++Y +D ED + F + E F GY+V P++ I+ D D+ + + + +
Sbjct: 852 WHNQYEAEDAHTEDQKPVRFAVDPEQFADFSWRGYAVFSPIQDKILIDVDITKATVYRLL 911
Query: 391 FKY 399
F+Y
Sbjct: 912 FRY 914
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 232 RSEYSEDDKAVEDLDFFIGDEAFEATGYSVKYPVRH 339
R E ++DK V+DL + + A A+G+S++ P H
Sbjct: 619 RVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSH 654
>AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical
protein M70.4 protein.
Length = 822
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 424 DDLRVPHGDT*TRTVRCTFPLNPSLLRYRGAQDTLQSI 311
+DL +P G+ + +F L SL ++ G +DT S+
Sbjct: 418 EDLNIPQGNNWANPIHTSFCLPKSLHKWAGRRDTSSSM 455
>AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical
protein Y48G1BL.7 protein.
Length = 338
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 694 FLPAIGMCFIHDPITYPSATGTM 626
FL AI MCF+HDP T+ + T+
Sbjct: 96 FLTAI-MCFLHDPQTFKDSNRTL 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,808,945
Number of Sequences: 27780
Number of extensions: 386268
Number of successful extensions: 1064
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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