Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00478
         (731 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130539-1|AAI30540.1|  734|Homo sapiens family with sequence si...    30   7.4  
BC130513-1|AAI30514.1|  734|Homo sapiens family with sequence si...    30   7.4  
AY457926-1|AAR20839.1|  734|Homo sapiens cancer associated nucle...    30   7.4  
AB058774-1|BAB47500.2|  821|Homo sapiens KIAA1871 protein protein.     30   9.8  

>BC130539-1|AAI30540.1|  734|Homo sapiens family with sequence
           similarity 111, member B protein.
          Length = 734

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 408 IKQGSTAATEPSPATVIKNSTEVHKIKKRGISNRLQRKRQQ 530
           IKQ  +A  E +  ++I++  +VHK KK G +  ++  R+Q
Sbjct: 283 IKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 323


>BC130513-1|AAI30514.1|  734|Homo sapiens family with sequence
           similarity 111, member B protein.
          Length = 734

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 408 IKQGSTAATEPSPATVIKNSTEVHKIKKRGISNRLQRKRQQ 530
           IKQ  +A  E +  ++I++  +VHK KK G +  ++  R+Q
Sbjct: 283 IKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 323


>AY457926-1|AAR20839.1|  734|Homo sapiens cancer associated
           nucleoprotein protein.
          Length = 734

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 408 IKQGSTAATEPSPATVIKNSTEVHKIKKRGISNRLQRKRQQ 530
           IKQ  +A  E +  ++I++  +VHK KK G +  ++  R+Q
Sbjct: 283 IKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 323


>AB058774-1|BAB47500.2|  821|Homo sapiens KIAA1871 protein protein.
          Length = 821

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = +2

Query: 416 RIHCSDRTFTGH-CN*KFYGSS*N*KKRYFEQTSKKTPAVYKCNNTITVGENYTVGRFEQ 592
           R+H  ++ +  H C   F G +   K +      K    + +C  T +  E     R EQ
Sbjct: 329 RLHSGEKPYECHRCGKTFSGRTAFLKHQRLHAGEK----IEECEKTFSKDEEL---REEQ 381

Query: 593 IVSVREPITTVNISGRNWLQHGDLLDLKVTYAGSPPFD 706
            +   E     N  GRN+    DL+  +VT+ G  P++
Sbjct: 382 RIHQEEKAYWCNQCGRNFQGTSDLIRHQVTHTGEKPYE 419


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,648,258
Number of Sequences: 237096
Number of extensions: 1536317
Number of successful extensions: 6509
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6509
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)