Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00477
(693 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 45 8e-07
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 36 4e-04
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 29 0.042
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 28 0.097
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 27 0.17
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 27 0.22
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 26 0.39
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.8
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 44.8 bits (101), Expect = 8e-07
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 33 RHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKPWPKRA 164
RHM IHTG +P+KC C K F SG+L H+ +KP+ +A
Sbjct: 165 RHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKA 208
Score = 40.3 bits (90), Expect = 2e-05
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 36 HMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKPW 152
HM HTG KPY C C K FT S +L+ H +KP+
Sbjct: 194 HMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPY 232
Score = 38.7 bits (86), Expect = 5e-05
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 36 HMFIHTGLKPYKCDTCLKCFTTSGELRAHV 125
H IHT +PYKCD C + F SG+L H+
Sbjct: 138 HRRIHTKERPYKCDVCERAFEHSGKLHRHM 167
Score = 38.3 bits (85), Expect = 7e-05
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 33 RHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKK 146
RH HTG KPY+C+ C K F+ L H +H K+
Sbjct: 109 RHYRTHTGEKPYQCEYCSKSFSVKENLSVH-RRIHTKE 145
Score = 33.1 bits (72), Expect = 0.003
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 36 HMFIHTGLKPYKCDTCLKCFTTSGELRAH 122
H HTG KPY CD C K F + L+ H
Sbjct: 222 HTRTHTGEKPYTCDICGKSFGYNHVLKLH 250
Score = 27.9 bits (59), Expect = 0.097
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 18 YNN-RRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVE 128
YN+ + H H G K YKC C + F + + H++
Sbjct: 243 YNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 54 GLKPYKCDTCLKCFTTSGELRAHVEHVHMKKPW 152
G PY+C+ C K F L H +KP+
Sbjct: 88 GEDPYRCNICGKTFAVPARLTRHYRTHTGEKPY 120
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 35.9 bits (79), Expect = 4e-04
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 30 RRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVH 137
+ HM +HTG KPY C C + F LR H+ VH
Sbjct: 26 KTHMRLHTGEKPYHCSHCDRQFVQVANLRRHL-RVH 60
Score = 33.9 bits (74), Expect = 0.001
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 48 HTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKPW 152
HTG KP++C C K FT L+ H+ +KP+
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPY 38
Score = 33.9 bits (74), Expect = 0.001
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 24 NRRRHMFIHTGLKPYKCDTC 83
N RRH+ +HTG +PY C+ C
Sbjct: 52 NLRRHLRVHTGERPYACELC 71
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 29.1 bits (62), Expect = 0.042
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 66 YKCDTCLKCFTTSGELRAHVEHVHMK 143
++C+ C K T+ LR H+++VH +
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTR 28
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 27.9 bits (59), Expect = 0.097
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 36 HMFIHTGLKPYKCDTCLKCFTTSGELRAHVE 128
H+ H G KP+KC+ C L +H++
Sbjct: 7 HLRNHFGSKPFKCEKCSYSCVNKSMLNSHLK 37
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 27.1 bits (57), Expect = 0.17
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 36 HMFIHTGLKPYKCDTCLKCF 95
H+ HTG KP+ C C + F
Sbjct: 61 HIRTHTGEKPFSCQHCNRAF 80
Score = 26.2 bits (55), Expect = 0.30
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 39 MFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKPW 152
M I T P KC C K F+ L+ H+ +KP+
Sbjct: 34 MHIRTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPF 71
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 26.6 bits (56), Expect = 0.22
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 23 QQETPYVHPHWPEAVQMRHVP 85
Q TP H +P A+Q+ H P
Sbjct: 443 QHSTPLAHSSYPAAIQIGHTP 463
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 17 LQQQETPYVHPHWPE 61
+Q TP+ HPH PE
Sbjct: 457 IQIGHTPHHHPHPPE 471
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.8 bits (54), Expect = 0.39
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 66 YKCDTCLKCFTTSGELRAHVEHVHMK 143
Y CD C K +T L+ H E H +
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQ 397
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 21 NNRRRHMFIHTGLKPY 68
NN MF HTGL Y
Sbjct: 266 NNNNGDMFCHTGLGHY 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,488
Number of Sequences: 438
Number of extensions: 3632
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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