Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00476
(766 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 39 0.004
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 38 0.007
At2g16640.1 68415.m01910 chloroplast outer membrane protein, put... 38 0.010
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 33 0.16
At1g03160.1 68414.m00293 GTP-binding protein-related contains TI... 33 0.21
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 33 0.21
At5g20300.1 68418.m02416 chloroplast outer membrane protein, put... 32 0.36
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 32 0.48
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 32 0.48
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 32 0.48
At1g33890.1 68414.m04201 avirulence-responsive protein, putative... 32 0.48
At4g15810.1 68417.m02406 chloroplast outer membrane protein, put... 31 0.84
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 31 1.1
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 30 1.5
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 30 1.9
At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transport... 29 3.4
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 29 3.4
At2g38840.1 68415.m04772 guanylate-binding family protein simila... 29 3.4
At1g51745.1 68414.m05831 expressed protein 29 3.4
At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter... 29 3.4
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 29 3.4
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 29 3.4
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 29 4.5
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 29 4.5
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 29 4.5
At2g46920.2 68415.m05861 protein phosphatase 2C family protein /... 29 4.5
At2g46920.1 68415.m05860 protein phosphatase 2C family protein /... 29 4.5
At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /... 28 5.9
At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /... 28 5.9
At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /... 28 5.9
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 28 5.9
At1g33900.1 68414.m04202 avirulence-responsive protein, putative... 28 5.9
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 28 5.9
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 28 7.8
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 28 7.8
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 28 7.8
At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putati... 28 7.8
At4g16960.1 68417.m02558 disease resistance protein (TIR-NBS-LRR... 28 7.8
At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR... 28 7.8
At4g09520.1 68417.m01565 2,3-biphosphoglycerate-independent phos... 28 7.8
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 28 7.8
At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter... 28 7.8
>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1089
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +1
Query: 262 FEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 441
F T+MV+G+SG+GKS +NS+F +L ++ DA + + V+ +E +G+K+
Sbjct: 455 FSCTIMVLGKSGVGKSATINSIF-DEL---KISTDAFQVGTKKVQ----DIEGFVQGIKV 506
Query: 442 RLTVVDTPG 468
R V+DTPG
Sbjct: 507 R--VIDTPG 513
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F ++++G+SG+GKS+L+ S I + E T+ +D +++ RG +L+L
Sbjct: 14 FKILLIGDSGVGKSSLLLSF----------ISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63
Query: 448 TVVDTPGYGDAIDNTDCFRSKFNTLTSS 531
T+ DT G + KF TLTSS
Sbjct: 64 TIWDTAG-----------QEKFRTLTSS 80
>At2g16640.1 68415.m01910 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1206
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +1
Query: 262 FEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 441
F T+MV+G+SG+GKS +NS+F + DA + + V+ VE +G+K+
Sbjct: 573 FSCTIMVLGKSGVGKSATINSIF----DEVKFCTDAFQMGTKRVQ----DVEGLVQGIKV 624
Query: 442 RLTVVDTPG 468
R V+DTPG
Sbjct: 625 R--VIDTPG 631
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F ++++G+SG+GKS+L+ S I + E T+ +D ++ G +L+L
Sbjct: 14 FKILLIGDSGVGKSSLLVSF----------ISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63
Query: 448 TVVDTPG 468
T+ DT G
Sbjct: 64 TIWDTAG 70
>At1g03160.1 68414.m00293 GTP-binding protein-related contains
TIGRFAM TIGR00650: GTP-binding conserved hypothetical
protein domain; contains TIGRFAM TIGR00231: small
GTP-binding protein domain; similar to mitofusin 1
precursor (GI:12744896) [Homo sapiens]
Length = 642
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEER 429
F +++VGE GKST++N+L E V+P TN+ L S +E EE+
Sbjct: 350 FLMVIVGEFNSGKSTVINALLGKRYLKEGVVP----TTNEITFLCYSDLESEEQ 399
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F L+++G+SG+GKS L+ F D Y E I T+ +D +E+ G ++L
Sbjct: 9 FKLLLIGDSGVGKSCLL-LRFSDDSYVESYI--------STIGVDFKIRTVEQDGKTIKL 59
Query: 448 TVVDTPG 468
+ DT G
Sbjct: 60 QIWDTAG 66
>At5g20300.1 68418.m02416 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 793
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 262 FEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 441
F ++V+G++G+GKS +NS+F T++ + + TV GVK
Sbjct: 165 FSLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVM----GTVS----GVK- 215
Query: 442 RLTVVDTPGY 471
+T +DTPG+
Sbjct: 216 -VTFIDTPGF 224
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F L+++G+SG+GKS L+ F D Y + I T+ +D +E+ G ++L
Sbjct: 9 FKLLLIGDSGVGKSCLL-LRFADDSYLDSYI--------STIGVDFKIRTVEQDGKTIKL 59
Query: 448 TVVDTPG 468
+ DT G
Sbjct: 60 QIWDTAG 66
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F L+++G+SG+GKS L+ F D Y + I T+ +D +E+ G ++L
Sbjct: 9 FKLLLIGDSGVGKSCLL-LRFADDSYLDSYI--------STIGVDFKIRTVEQDGKTIKL 59
Query: 448 TVVDTPG 468
+ DT G
Sbjct: 60 QIWDTAG 66
>At4g02510.1 68417.m00343 chloroplast outer membrane protein, putative
similar to chloroplast protein import component Toc159
[Pisum sativum] GI:8489806, chloroplast outer envelope
protein 86 [Pisum sativum] GI:599958, GTP-binding protein
[Pisum sativum] GI:576509
Length = 1503
Score = 31.9 bits (69), Expect = 0.48
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 262 FEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 441
F ++V+G++G+GKS +NS+ L + DA + +V+ + TV GVK
Sbjct: 854 FSLNILVLGKAGVGKSATINSI----LGNQIASIDAFGLSTTSVREISGTV----NGVK- 904
Query: 442 RLTVVDTPGYGDA 480
+T +DTPG A
Sbjct: 905 -ITFIDTPGLKSA 916
>At1g33890.1 68414.m04201 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 334
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 274 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 453
+++VG +G GKS NSL D++ KT QT K + G R+ V
Sbjct: 16 IVLVGRTGNGKSATGNSLIGKDVFVSEAKATGVTKTCQTYK------AVTPGG--SRINV 67
Query: 454 VDTPGYGD 477
+DTPG D
Sbjct: 68 IDTPGLFD 75
>At4g15810.1 68417.m02406 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 898
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 262 FEFTLMVVGESGLGKSTLVNSLF 330
F ++V+G++G+GKS VNS+F
Sbjct: 608 FSINVLVIGKTGVGKSATVNSIF 630
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F ++++G+SG+GKS L++ + E E +T+K+D V+ +
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQ 65
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F L+++G+S +GKS L+ F D Y + I T+ +D IE+ G ++L
Sbjct: 9 FKLLLIGDSSVGKSCLL-LRFADDAYIDSYI--------STIGVDFKIRTIEQDGKTIKL 59
Query: 448 TVVDTPG 468
+ DT G
Sbjct: 60 QIWDTAG 66
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F L+++G+SG+GKS L++ + E E +T K++ V+ +
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQ 65
>At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1292
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 271 TLMVVGESGLGKSTLVNSL-FLTDLYPERVIPDATE-KTNQTVKLDASTVEIEERGVKLR 444
T+ +VGESG GKST++ L D ++ D E KT Q L T + + V
Sbjct: 1078 TIALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEIKTLQLKWLRQQTGLVSQEPVLFN 1137
Query: 445 LTVVDTPGYGDAIDNTD 495
T+ YG D T+
Sbjct: 1138 ETIRANIAYGKGGDATE 1154
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F ++++G+S +GKS L+ S F D + D K V+ VEIE + VK +
Sbjct: 13 FKIVLIGDSAVGKSNLL-SRFSRDEF------DTNSKATIGVEFQTQLVEIEGKEVKAQ- 64
Query: 448 TVVDTPG 468
+ DT G
Sbjct: 65 -IWDTAG 70
>At2g38840.1 68415.m04772 guanylate-binding family protein similar
to SP|Q01514 Interferon-induced guanylate-binding
protein 1 (Guanine nucleotide-binding protein 1)
(Interferon-gamma inducible protein MAG-1) {Mus
musculus}; contains Pfam profile PF02263:
Guanylate-binding protein, N-terminal domain
Length = 679
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 280 VVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTVVD 459
V+G GKS L+N L Y + + + + + + +E+E GVK + +D
Sbjct: 65 VIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSVIYLD 124
Query: 460 TPGY 471
T G+
Sbjct: 125 TEGF 128
>At1g51745.1 68414.m05831 expressed protein
Length = 635
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 639 PLDIEFMKQLH-NKVNIVPVIAKADCLTKKEVQRLKSR 749
PL +E +++ + N + + PV+AKA L KK ++ KSR
Sbjct: 519 PLSVEILEEDYSNGMVMPPVVAKAKSLPKKNGKKKKSR 556
>At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter
(MRP1) identical to glutathione S-conjugate transporting
ATPase (AtMRP1) [Arabidopsis thaliana] GI:2340166
Length = 1622
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 280 VVGESGLGKSTLVNSLF-LTDLYPERVIPD 366
+VG +G GKS+L+N+LF + +L R++ D
Sbjct: 1269 IVGRTGAGKSSLLNALFRIVELEKGRILID 1298
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F ++++G+SG+GKS L++ + E E +T++++ TV+ +
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F ++++G+SG+GKS +++ + E E +T++++ TV+ +
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 447
F ++++G+S +GKS L+ + YP + T+ ++ T +++ G +++
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYP---------NSKSTIGVEFQTQKMDINGKEIKA 65
Query: 448 TVVDTPG 468
+ DT G
Sbjct: 66 QIWDTAG 72
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 271 TLMVVGESGLGKSTLVNSLFLTDLY 345
T+ VVG + GKSTL+++L T LY
Sbjct: 911 TIAVVGYTNAGKSTLISALTKTALY 935
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 28.7 bits (61), Expect = 4.5
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +1
Query: 271 TLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLT 450
T+ ++G +GKS+L+NSL + P T ++ Q V LD + ++ GV
Sbjct: 255 TVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLT-RSLQEVHLDKNVKLLDCPGV----V 309
Query: 451 VVDTPGYGDAIDNTDCFR-SKFNTLTSSSKDFFETRAA*TVVTLWTI-VFIAVSTSYHRL 624
++ + G +I +C R K + S K+ + +VTL+ I F AV +++
Sbjct: 310 MLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKDMLVTLYKIPSFEAVDDFLYKV 369
Query: 625 DT 630
T
Sbjct: 370 AT 371
>At2g46920.2 68415.m05861 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 856
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +1
Query: 361 PDATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSKFNTLTSSS 534
PD T ++ +D+ST++ E R +VD P + + ++ + F ++ +S
Sbjct: 48 PDITPSNSERFTIDSSTIDSETLTGSFRNDIVDDPSFLNRHNSKGLAETTFKAISGAS 105
>At2g46920.1 68415.m05860 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 856
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +1
Query: 361 PDATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSKFNTLTSSS 534
PD T ++ +D+ST++ E R +VD P + + ++ + F ++ +S
Sbjct: 48 PDITPSNSERFTIDSSTIDSETLTGSFRNDIVDDPSFLNRHNSKGLAETTFKAISGAS 105
>At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 271 TLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLT 450
T++V+G+ G+GKS+ VNS+ E+ A T Q+ L + V G L
Sbjct: 40 TVLVMGKGGVGKSSTVNSVI-----GEKA---AAVSTFQSEGLRPTLVSRTRSG--FTLN 89
Query: 451 VVDTPG 468
++DTPG
Sbjct: 90 IIDTPG 95
>At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 271 TLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLT 450
T++V+G+ G+GKS+ VNS+ E+ A T Q+ L + V G L
Sbjct: 40 TVLVMGKGGVGKSSTVNSVI-----GEKA---AAVSTFQSEGLRPTLVSRTRSG--FTLN 89
Query: 451 VVDTPG 468
++DTPG
Sbjct: 90 IIDTPG 95
>At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 271 TLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLT 450
T++V+G+ G+GKS+ VNS+ E+ A T Q+ L + V G L
Sbjct: 40 TVLVMGKGGVGKSSTVNSVI-----GEKA---AAVSTFQSEGLRPTLVSRTRSG--FTLN 89
Query: 451 VVDTPG 468
++DTPG
Sbjct: 90 IIDTPG 95
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F ++++G+SG+GKS +++ + E E +T +++ T++ +
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQ 64
>At1g33900.1 68414.m04202 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 326
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +1
Query: 274 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 453
+++VG +G GKS NSL ++V T T T+K + + V + G + V
Sbjct: 22 IVLVGRTGNGKSATGNSLI-----GKQVFRSETRATGVTMKCE-TCVAVTPCGT--GINV 73
Query: 454 VDTPGYGD 477
+DTPG D
Sbjct: 74 IDTPGLFD 81
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 271 TLMVVGESGLGKSTLVNSL 327
T++V+G+ G+GKS+ VNSL
Sbjct: 38 TVLVLGKGGVGKSSTVNSL 56
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 256 KGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEI 420
KG+ T++ G++G GK+ + + + D VIP+ E + V+ + E+
Sbjct: 75 KGYNATVLAYGQTGSGKTYTMGTNYSGDCTNGGVIPNVMEDIFRRVETTKDSSEL 129
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F ++++G+SG+GK+ +++ + E E +T++++ TV+ +
Sbjct: 13 FKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F L+++G+SG+GKS L++ + E E ++V +D ++ +
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQ 65
>At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1208537 from [Glycine
max]
Length = 205
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +1
Query: 262 FEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 441
+ F +++G++G+GKS L+ L TD +R A V+ A T+ I+ + +KL
Sbjct: 5 YRFKYIIIGDTGVGKSCLL--LKFTD---KRF--QAVHDLTIGVEFGAKTITIDNKPIKL 57
Query: 442 RLTVVDTPG 468
+ + DT G
Sbjct: 58 Q--IWDTAG 64
>At4g16960.1 68417.m02558 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1041
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 244 KICKKGFEFTLMVV--GESGLGKSTLVNSLF 330
K+C + E +MV G+SG+GKST+ +LF
Sbjct: 200 KLCLESKEARIMVGIWGQSGIGKSTIGRALF 230
>At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1103
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 244 KICKKGFEFTLMVV--GESGLGKSTLVNSLF 330
K+C + E +MV G+SG+GKST+ +LF
Sbjct: 193 KLCLESKEARIMVGIWGQSGIGKSTIGRALF 223
>At4g09520.1 68417.m01565 2,3-biphosphoglycerate-independent
phosphoglycerate mutase family protein /
phosphoglyceromutase family protein contains similarity
to 2,3-bisphosphoglycerate-independent phosphoglycerate
mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1)
(BPG-independent PGAM 1) (aPGAM 1) (aPGAM-Mj1).
(Swiss-Prot:Q59007) [Methanococcus jannaschii]; contains
weak hit to Pfam profile PF01676: Metalloenzyme
superfamily
Length = 492
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -1
Query: 706 ALAITGTMLTLLCS---CFMNSISRGFNPCPN 620
AL TG TLL S N++S NPCPN
Sbjct: 276 ALGATGDYRTLLTSKAIAIANALSAPLNPCPN 307
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +1
Query: 268 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 423
F ++++G+S +GKS L+ + P E Q++ +D V+ +
Sbjct: 13 FKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQ 64
>At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter
(MRP2) almost identical to MgATP-energized glutathione
S-conjugate pump GI:2909781 from [Arabidopsis thaliana]
Length = 1623
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 280 VVGESGLGKSTLVNSLF-LTDLYPERVIPD 366
+VG +G GKS+L+N+LF + ++ R++ D
Sbjct: 1274 IVGRTGAGKSSLLNALFRIVEVEKGRILID 1303
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,465,875
Number of Sequences: 28952
Number of extensions: 275565
Number of successful extensions: 1073
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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