Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00474
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113608-1|AAI13609.1| 522|Homo sapiens chromosome 6 open readi... 31 3.0
BC113606-1|AAI13607.1| 522|Homo sapiens chromosome 6 open readi... 31 3.0
BC108714-1|AAI08715.1| 522|Homo sapiens chromosome 6 open readi... 31 3.0
BC012928-1|AAH12928.1| 473|Homo sapiens C6orf150 protein protein. 31 3.0
AL603910-3|CAI14879.1| 447|Homo sapiens chromosome 6 open readi... 31 3.0
AL603910-2|CAI14878.1| 522|Homo sapiens chromosome 6 open readi... 31 3.0
AL603910-1|CAO03612.1| 505|Homo sapiens chromosome 6 open readi... 31 3.0
AK097148-1|BAC04965.1| 522|Homo sapiens protein ( Homo sapiens ... 31 3.0
AK122587-1|BAC56928.1| 749|Homo sapiens FLJ00412 protein protein. 30 9.2
>BC113608-1|AAI13609.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 278 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 329
>BC113606-1|AAI13607.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 278 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 329
>BC108714-1|AAI08715.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 278 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 329
>BC012928-1|AAH12928.1| 473|Homo sapiens C6orf150 protein protein.
Length = 473
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 304 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 355
>AL603910-3|CAI14879.1| 447|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 447
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 278 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 329
>AL603910-2|CAI14878.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 278 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 329
>AL603910-1|CAO03612.1| 505|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 505
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 278 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 329
>AK097148-1|BAC04965.1| 522|Homo sapiens protein ( Homo sapiens
cDNA FLJ39829 fis, clone SPLEN2012800. ).
Length = 522
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 437 SYLRSVLREDIDALVKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSS 270
S R +++E+I+ + I+KRK G+P +LL+ I+VD + +A+ +KSS
Sbjct: 278 SKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEK--ISVD--ITLALESKSS 329
>AK122587-1|BAC56928.1| 749|Homo sapiens FLJ00412 protein protein.
Length = 749
Score = 29.9 bits (64), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 12 RSLFRRCFGTPPCDGGVSRLHLPGYLW 92
RS+FRR PP + SRL L LW
Sbjct: 91 RSIFRRVLSAPPKESRTSRLRLSKALW 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,954,861
Number of Sequences: 237096
Number of extensions: 2279298
Number of successful extensions: 4320
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4320
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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