Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00468
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 165 2e-41
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 165 3e-41
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 165 3e-41
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 165 3e-41
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 165 3e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 91 4e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 79 2e-15
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 73 2e-13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 6e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.010
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.010
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 33 0.16
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.28
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.49
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.49
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.49
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 29 2.6
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 29 2.6
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 28 4.6
Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.1
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 28 6.1
Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical pr... 27 8.1
AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity ... 27 8.1
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEALFQPSFLGME+ G
Sbjct: 254 ERFRCPEALFQPSFLGMESAG 274
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 353 FQQMWISKQEYDESGPSI 370
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 232 LGYGSLRHHETTYNSIMKCDVDIRK 306
LG S HET+YNSIMKCD+DIRK
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEALFQPSFLGME+ G
Sbjct: 254 ERFRCPEALFQPSFLGMESAG 274
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 353 FQQMWISKQEYDESGPSI 370
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 232 LGYGSLRHHETTYNSIMKCDVDIRK 306
LG S HET+YNSIMKCD+DIRK
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEALFQPSFLGME+ G
Sbjct: 254 ERFRCPEALFQPSFLGMESAG 274
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 353 FQQMWISKQEYDESGPSI 370
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 232 LGYGSLRHHETTYNSIMKCDVDIRK 306
LG S HET+YNSIMKCD+DIRK
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 165 bits (402), Expect = 2e-41
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 150 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 209
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEALFQPSFLGME+ G
Sbjct: 210 ERFRCPEALFQPSFLGMESAG 230
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 249 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 308
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 309 FQQMWISKQEYDESGPSI 326
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 232 LGYGSLRHHETTYNSIMKCDVDIRK 306
LG S HET+YNSIMKCD+DIRK
Sbjct: 224 LGMESAGIHETSYNSIMKCDIDIRK 248
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 316 KQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 165 bits (402), Expect = 2e-41
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 180 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 239
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEALFQPSFLGME+ G
Sbjct: 240 ERFRCPEALFQPSFLGMESAG 260
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 279 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 338
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 339 FQQMWISKQEYDESGPSI 356
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 232 LGYGSLRHHETTYNSIMKCDVDIRK 306
LG S HET+YNSIMKCD+DIRK
Sbjct: 254 LGMESAGIHETSYNSIMKCDIDIRK 278
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 346 KQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEALFQPSFLGME+ G
Sbjct: 254 ERFRCPEALFQPSFLGMESAG 274
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 353 FQQMWISKQEYDESGPSI 370
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 232 LGYGSLRHHETTYNSIMKCDVDIRK 306
LG S HET+YNSIMKCD+DIRK
Sbjct: 268 LGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 165 bits (400), Expect = 3e-41
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEA+FQPSFLGME+ G
Sbjct: 254 ERFRCPEAMFQPSFLGMESAG 274
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 353 FQQMWISKQEYDESGPSI 370
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +1
Query: 205 PRGSLPTLVLGYGSLRHHETTYNSIMKCDVDIRK 306
P LG S HET+YNSIMKCD+DIRK
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 165 bits (400), Expect = 3e-41
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEA+FQPSFLGME+ G
Sbjct: 254 ERFRCPEAMFQPSFLGMESAG 274
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 353 FQQMWISKQEYDESGPSI 370
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +1
Query: 205 PRGSLPTLVLGYGSLRHHETTYNSIMKCDVDIRK 306
P LG S HET+YNSIMKCD+DIRK
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 165 bits (400), Expect = 3e-41
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEA+FQPSFLGME+ G
Sbjct: 254 ERFRCPEAMFQPSFLGMESAG 274
Score = 137 bits (331), Expect = 7e-33
Identities = 67/78 (85%), Positives = 69/78 (88%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 352 FQQMWISKQEYDESGPSI 369
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +1
Query: 205 PRGSLPTLVLGYGSLRHHETTYNSIMKCDVDIRK 306
P LG S HET+YNSIMKCD+DIRK
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (400), Expect = 3e-41
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPEA+FQPSFLGME+ G
Sbjct: 254 ERFRCPEAMFQPSFLGMESAG 274
Score = 143 bits (346), Expect = 1e-34
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 353 FQQMWISKQEYDESGPSI 370
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +1
Query: 205 PRGSLPTLVLGYGSLRHHETTYNSIMKCDVDIRK 306
P LG S HET+YNSIMKCD+DIRK
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 153 bits (370), Expect = 1e-37
Identities = 71/81 (87%), Positives = 75/81 (92%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
LTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGN
Sbjct: 193 LTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGN 252
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERFRCPE LFQP+F+GME G
Sbjct: 253 ERFRCPEVLFQPAFIGMEGAG 273
Score = 135 bits (326), Expect = 3e-32
Identities = 64/78 (82%), Positives = 68/78 (87%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 485
DLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 486 FQQMWISNRSTTSLAPPL 539
FQQMWIS + P +
Sbjct: 352 FQQMWISKQEYDESGPSI 369
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 EQEYDESGPSIVHRKCF 556
+QEYDESGPSIVHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 256 HETTYNSIMKCDVDIRK 306
HETTY SIMKCDVDIRK
Sbjct: 275 HETTYQSIMKCDVDIRK 291
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
L +RGY+F +A+ E VR +KEKLCY+A D EQE A ++ L + Y LPDG+VI +G
Sbjct: 197 LLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGG 256
Query: 191 ERFRCPEALFQPSFLGMEACG 253
ERF PE LFQP + +E G
Sbjct: 257 ERFEAPEILFQPHLINVEKAG 277
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Frame = +3
Query: 306 DLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVW 452
D Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V+
Sbjct: 296 DFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVF 355
Query: 453 IGGSILASL--STFQQMWISNR 512
+GG++LA+L Q W+S +
Sbjct: 356 LGGAVLANLMKDRDQDFWVSKK 377
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 309 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 488
LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 489 QQMWISNR 512
++MW+ +
Sbjct: 352 RKMWLGKK 359
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/78 (44%), Positives = 45/78 (57%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 190
L GY F + E EIVR++KE CY+ALD T ++S++ SY LPD I I N
Sbjct: 197 LRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISN 251
Query: 191 ERFRCPEALFQPSFLGME 244
FR PE LF+P +G E
Sbjct: 252 SLFRAPEVLFKPDLIGTE 269
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Frame = +3
Query: 309 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 479
L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 480 STFQQMWIS 506
TFQQMW+S
Sbjct: 411 GTFQQMWVS 419
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 512 EYDESGPSIVHRKC 553
EYDESG SIV +KC
Sbjct: 422 EYDESGKSIVEKKC 435
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 152 YELPDGQVITIGNERFRCPEALFQPSFLGME 244
Y P+G G ER + PE LF +L E
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAE 323
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/81 (32%), Positives = 48/81 (59%)
Frame = +3
Query: 309 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 488
LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530
Query: 489 QQMWISNRSTTSLAPPLYTGS 551
+ IS + L + S
Sbjct: 531 EDSCISLQQLPKFLAQLQSSS 551
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 26 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNER 196
Y+F + E+ I+R E+ YV D+++E + + SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 197 FRCPEALFQPSFLGMEACG 253
F C E LF+P G++ G
Sbjct: 433 FLCTEGLFKPKKWGLDTKG 451
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.2 bits (117), Expect = 6e-07
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 16/88 (18%)
Frame = +3
Query: 282 EVRRGHP*DLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKI 413
+VRRG LY N VLSGG+TM+ A ++Q+++ L+ P + +
Sbjct: 317 DVRRG----LYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDV 372
Query: 414 KIIAPPERKYSVWIGGSILASLSTFQQM 497
++I+ ++Y+VW GGS+LAS S F Q+
Sbjct: 373 QVISHKMQRYAVWFGGSMLASTSEFYQV 400
Score = 35.1 bits (77), Expect = 0.040
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = +2
Query: 11 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT-AASSSSLEKSYELPDGQV---- 175
L +R ++ E+ + IKEK CYV D +E ++ ++Y+ +
Sbjct: 215 LRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPF 274
Query: 176 -ITIGNERFRCPEALFQPSFLGME 244
+ +G ERF PE F P F E
Sbjct: 275 NVDVGYERFLGPEIFFHPEFCNPE 298
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 22/91 (24%)
Frame = +2
Query: 47 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 175
E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 176 -----ITIGNERFRCPEALFQPSFLGMEACG 253
I +G ERF PE LF PS + ++ CG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Score = 31.1 bits (67), Expect = 0.65
Identities = 9/37 (24%), Positives = 24/37 (64%)
Frame = +3
Query: 309 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 419
L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 22/91 (24%)
Frame = +2
Query: 47 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 175
E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 176 -----ITIGNERFRCPEALFQPSFLGMEACG 253
I +G ERF PE LF PS + ++ CG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Score = 31.1 bits (67), Expect = 0.65
Identities = 9/37 (24%), Positives = 24/37 (64%)
Frame = +3
Query: 309 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 419
L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +3
Query: 6 RASPSAATRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLS 185
RA P AAT + PP G ++ R A +S R +PP P + S ++ P R+SL
Sbjct: 142 RAPPPAATSTYRPPHGSNYDNYGREPA----SSRRPYPPQQPPSTSAPHSS-PNNRTSLY 196
Query: 186 ETKDSVAQRLSSNPR 230
+ +NPR
Sbjct: 197 NPQPPPKTGYPTNPR 211
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = +3
Query: 309 LYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGG 461
L+ N +L+GG + PG+ R+++EI + + KI +I E K + W+G
Sbjct: 209 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGA 268
Query: 462 SILASL 479
S+L SL
Sbjct: 269 SLLGSL 274
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 452 PYGVLPLWRSNDLNLHCRWGESCD 381
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 452 PYGVLPLWRSNDLNLHCRWGESCD 381
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 452 PYGVLPLWRSNDLNLHCRWGESCD 381
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 500 DLEQEYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 613
+L +Y ++G SIV+ KC T R P R R LN G
Sbjct: 26 NLTDDYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 87 TSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSW 236
+S L S+ WP L + S + FPT RS L E K + S P S+
Sbjct: 32 SSALASANGWPQLSVDSQSSGTSGFPT-RSRLFEEKPLTYINIDSLPSSF 80
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 66 TSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETK 194
+SRRS S+ TS++ WP +APS S T T + + K
Sbjct: 80 SSRRSSLASVSTSTKNWPSKSSSAPS-SPTAGSTAKKEYEKVK 121
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 28.3 bits (60), Expect = 4.6
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 ARASPSAATRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTN-FPTVRSS 179
A A P + L PPS S +RRS TS + S R P R L N P V
Sbjct: 11 ALAIPQQFSSRLSPPSPASPAATRRSLPTSPI-SRRSLPSTPRTVSPRRLNNLLPDVDEH 69
Query: 180 LSETKDSVAQRLSSNPRSWVWKLAAPR 260
+ T S ++PR + PR
Sbjct: 70 FAST--STTSSSENSPRRVKKRYPPPR 94
>Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical
protein ZC376.4 protein.
Length = 252
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 287 ATWTSVRLVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCSSREEV 442
A W ++Q RI +W+ NRR + + DNED S R V
Sbjct: 43 AEWAQTYQIQQRRIRKWFD----NRRTRDRERRKRKGDDNEDSSEISKRGRV 90
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 615 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 523
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 615 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 523
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 211 LWATESFVSDSDDLTVGKFVRLLEGAAGCSGG 116
L++T SFVS + T + + + G +GC GG
Sbjct: 7 LFSTASFVSPATTSTTTRCMEQVGGGSGCGGG 38
>Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical
protein F31F6.6 protein.
Length = 582
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 486 FQQMWISNRSTTSLAPPLYTGSASKRTARRCLQQPAAGC 602
F MWISN +TT+L P+ ++ + ++ A C
Sbjct: 140 FLSMWISNTATTALMVPILQSVITELVSNHRMEDLVALC 178
>AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity
dicarboxylate transporterINDY1 protein.
Length = 582
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 486 FQQMWISNRSTTSLAPPLYTGSASKRTARRCLQQPAAGC 602
F MWISN +TT+L P+ ++ + ++ A C
Sbjct: 140 FLSMWISNTATTALMVPILQSVITELVSNHRMEDLVALC 178
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = -3
Query: 178 DDLTVGKFVRLLEGAAGCSGG-HFLLEVKSDVAQL-LLDVTNDFP--LGGGSER 29
D+LTV + +RL+ G SGG F ++ +S + Q+ L D N L GG +R
Sbjct: 537 DELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQIELTDKRNTLAKNLSGGMKR 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,368,378
Number of Sequences: 27780
Number of extensions: 344131
Number of successful extensions: 1229
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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