Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00467
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060839-1|AAH60839.1|  254|Homo sapiens protein tyrosine phosph...    31   4.0  
BC049369-1|AAH49369.1|  254|Homo sapiens protein tyrosine phosph...    31   4.0  
AY191814-1|AAP20101.1|  254|Homo sapiens protein tyrosine phosph...    31   4.0  
BC050336-1|AAH50336.1| 1553|Homo sapiens FRYL protein protein.         30   7.0  
AF260333-1|AAG44664.1|  142|Homo sapiens AD036 protein.                30   7.0  

>BC060839-1|AAH60839.1|  254|Homo sapiens protein tyrosine
           phosphatase-like (proline instead of catalytic
           arginine), memb protein.
          Length = 254

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 189 FFIIYKQNI--KLFSIYLVFLFVELLILYFVAFYLKYSFFFTYYS 317
           F ++Y   +  +L +IY    FV    LY ++   KY+F F YY+
Sbjct: 172 FIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYA 216


>BC049369-1|AAH49369.1|  254|Homo sapiens protein tyrosine
           phosphatase-like (proline instead of catalytic
           arginine), memb protein.
          Length = 254

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 189 FFIIYKQNI--KLFSIYLVFLFVELLILYFVAFYLKYSFFFTYYS 317
           F ++Y   +  +L +IY    FV    LY ++   KY+F F YY+
Sbjct: 172 FIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYA 216


>AY191814-1|AAP20101.1|  254|Homo sapiens protein tyrosine
           phosphatase-like member b protein.
          Length = 254

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 189 FFIIYKQNI--KLFSIYLVFLFVELLILYFVAFYLKYSFFFTYYS 317
           F ++Y   +  +L +IY    FV    LY ++   KY+F F YY+
Sbjct: 172 FIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYA 216


>BC050336-1|AAH50336.1| 1553|Homo sapiens FRYL protein protein.
          Length = 1553

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
 Frame = -3

Query: 651  SLVLALILSLIEQNLSIKVIQNQSHIREVFKMFRHVINT**YSII-----HYCETKQQLN 487
            S ++A I+  +  +    +   QS    +F +F H      +SI+      Y +   Q+N
Sbjct: 1045 SALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGP--FSIMFTPLDRYSDRNMQIN 1102

Query: 486  EHSYCALYKSIIEILLC 436
             H YCAL K++  +L C
Sbjct: 1103 RHQYCAL-KAMSAVLCC 1118


>AF260333-1|AAG44664.1|  142|Homo sapiens AD036 protein.
          Length = 142

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -1

Query: 143 TKNKPSNRSKIK*N*I--RLLTNIFKSYLQTWTFNLRLVHHLALC 15
           T+ K  N   IK   I  +LL  +FKS  +TWT  + ++H   LC
Sbjct: 2   TRTKTVNLDNIKPQIIISKLLLTLFKSDWKTWTNQVHVLHLYVLC 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,688,440
Number of Sequences: 237096
Number of extensions: 1402282
Number of successful extensions: 1949
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)