Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00467
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80023-15|AAG24046.1|  343|Caenorhabditis elegans Serpentine rec...    33   0.20 
U80028-2|AAN73869.1|  351|Caenorhabditis elegans Serpentine rece...    33   0.26 
AF067950-4|AAG24157.1|  351|Caenorhabditis elegans Serpentine re...    33   0.26 
Z81100-2|CAB03192.2|  332|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z81100-4|CAE11309.1|  333|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine r...    30   1.4  
Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81560-3|CAB04548.2|  328|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL117200-7|CAB55059.1|  221|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC006693-6|AAF60383.2|  511|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC006693-4|AAF60381.2|  511|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC024780-3|AAF60571.2|  300|Caenorhabditis elegans Serpentine re...    27   9.9  

>U80023-15|AAG24046.1|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein200 protein.
          Length = 343

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 216 KLFSIYLVFLFVELLILYFVAFYLKYSFFFTYYSKQIVNL 335
           K F   L+ L V L+  +F +FY+  S    YY++ I+N+
Sbjct: 242 KFFITLLIQLIVPLVFFFFPSFYVLVSVIIKYYNQAILNI 281


>U80028-2|AAN73869.1|  351|Caenorhabditis elegans Serpentine
           receptor, class h protein88 protein.
          Length = 351

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +3

Query: 204 KQNIKLFSIYLVFLFVELLILYFVAFYLKYSFFFTYYSKQIVNLSL 341
           K  IK  +  L+ + + +L +   AFY+ ++  F YY++ + NLS+
Sbjct: 252 KLQIKFLASILLQISIPVLFMLPTAFYIWFAVDFNYYNQALTNLSI 297


>AF067950-4|AAG24157.1|  351|Caenorhabditis elegans Serpentine
           receptor, class h protein87 protein.
          Length = 351

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +3

Query: 204 KQNIKLFSIYLVFLFVELLILYFVAFYLKYSFFFTYYSKQIVNLSL 341
           K  IK  +  L+ + + +L +   AFY+ ++  F YY++ + NLS+
Sbjct: 252 KLQIKFLASILLQISIPVLFMLPTAFYIWFAVDFNYYNQALTNLSI 297


>Z81100-2|CAB03192.2|  332|Caenorhabditis elegans Hypothetical
           protein K08G2.5 protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 243 LFVELLILYFVAFYLKYSFFFTYYSKQIVNLS 338
           + + ++IL F AFY  +S +F YY++   NL+
Sbjct: 246 VIIPIVILAFPAFYFGFSVYFNYYNQGANNLT 277


>Z81100-4|CAE11309.1|  333|Caenorhabditis elegans Hypothetical
           protein K08G2.12 protein.
          Length = 333

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 243 LFVELLILYFVAFYLKYSFFFTYYSKQIVNLS 338
           + + ++I+ F AFY  +S +F YY++   NL+
Sbjct: 247 VIIPIVIIAFPAFYFGFSVYFNYYNQGANNLT 278


>AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine
           receptor, class h protein82 protein.
          Length = 360

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 204 KQNIKLFSIYLVFLFVELLILYFVAFYLKYSFFFTYYSKQIVNLSL 341
           K  I  F+  ++ + + +  L    FYL +S  F YY++ + NLS+
Sbjct: 252 KLQIAFFASIILQISIPITFLLPTFFYLGFSVGFKYYNQALTNLSV 297


>Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical
           protein Y7A9C.7 protein.
          Length = 311

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 231 YLVFLFVELLILYFVAFYLKYSFFFT 308
           +L FL  EL +LY V F L   FF T
Sbjct: 240 FLAFLLGELSLLYLVLFSLSIDFFTT 265


>Z81560-3|CAB04548.2|  328|Caenorhabditis elegans Hypothetical
           protein K02E2.3 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 216 KLFSIYLVF-LFVELLILYFVAFYLKYSFFFTYYSKQIVNLSL 341
           K F   + F + + L++L   +FY+ ++  F YY++   N++L
Sbjct: 235 KQFFFAICFHVIIPLIVLSIPSFYIFFAMRFDYYNQAATNIAL 277


>AL117200-7|CAB55059.1|  221|Caenorhabditis elegans Hypothetical
           protein Y50E8A.11 protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 210 NIKLFSIYLVFLFVELLILYFVAFYL 287
           NI L+S+ L+ + V LLIL F+ F+L
Sbjct: 152 NIVLYSV-LILVIVTLLILVFIVFFL 176


>AC006693-6|AAF60383.2|  511|Caenorhabditis elegans Hypothetical
           protein W02H5.3 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +3

Query: 240 FLFVELLILYFVAFYLKYSFFFTYYSK-QIV---NLSLENE*Q*KLY*HEME-SLLSLNH 404
           F    L  ++ + F+L +S FF+++ + Q++   N +L N  +     H M+  L ++ +
Sbjct: 38  FFAARLAAIFRIVFFLIFSSFFSFFERFQVIMPSNPTLSNTPKGSKKNHSMKFKLEAIQY 97

Query: 405 AKMYT 419
           AK YT
Sbjct: 98  AKKYT 102


>AC006693-4|AAF60381.2|  511|Caenorhabditis elegans Hypothetical
           protein W02H5.4 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +3

Query: 240 FLFVELLILYFVAFYLKYSFFFTYYSK-QIV---NLSLENE*Q*KLY*HEME-SLLSLNH 404
           F    L  ++ + F+L +S FF+++ + Q++   N +L N  +     H M+  L ++ +
Sbjct: 38  FFAARLAAIFRIVFFLIFSSFFSFFERFQVIMPSNPTLSNTPKGSKKNHSMKFKLEAIQY 97

Query: 405 AKMYT 419
           AK YT
Sbjct: 98  AKKYT 102


>AC024780-3|AAF60571.2|  300|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 50 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 222 FSIYLVFLFVELLILYFVAFYLKYSFFFTYYSKQIVNL 335
           + I+ VFL + ++IL  V+ +  YSF+       I+NL
Sbjct: 11  YGIFSVFLMIFMIILLSVSKHFTYSFYRVITMDIILNL 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,551,852
Number of Sequences: 27780
Number of extensions: 249442
Number of successful extensions: 710
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)