Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00466
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    28   0.062
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    28   0.062
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.25 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 485  RKDSLHPFWDWKKEINFLNVFDYFFVKIY-TYFRYFSFALLFTIFY 619
            +KD LH  W +  ++NF    D   + +Y TY +      +F IF+
Sbjct: 1246 KKDLLHLDWPFDPKVNFTYFEDKNEIGVYITYLQLEPIGFVFLIFF 1291


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 485  RKDSLHPFWDWKKEINFLNVFDYFFVKIY-TYFRYFSFALLFTIFY 619
            +KD LH  W +  ++NF    D   + +Y TY +      +F IF+
Sbjct: 1246 KKDLLHLDWPFDPKVNFTYFEDKNEIGVYITYLQLEPIGFVFLIFF 1291


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 8/38 (21%), Positives = 22/38 (57%)
 Frame = +2

Query: 542 VFDYFFVKIYTYFRYFSFALLFTIFYVTFIYYLYNTFI 655
           +F   F+ + TY+ Y++F +L  ++Y  + + ++   +
Sbjct: 91  IFTVHFL-LCTYYFYYAFIILLCVYYFYYAFIIFTVHL 127



 Score = 24.6 bits (51), Expect = 0.77
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 533 FLNVFDYFFVKIYTYFRYFSFALLFTIFYVTFIYYLYNTFI 655
           FL    YF V +  Y  +    ++FT+ ++   YY Y  FI
Sbjct: 72  FLLCSGYFTVHLLFYCPF----IIFTVHFLLCTYYFYYAFI 108



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 630 YIIFITHLLINTFYVY 677
           +IIF  H L+ T+Y Y
Sbjct: 89  FIIFTVHFLLCTYYFY 104



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +2

Query: 533 FLNVFDYFFVKIYTYFRYFSFALLFTIFYVTFIYYLYNTFINKHVLRL 676
           F   F  F V +      + F   F IF +  ++     F N H+L L
Sbjct: 149 FYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFL 196



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = +2

Query: 533 FLNVFDYFFVKIYTYFRYFSFALLFTIFYVTFIYYLYNTFINKHVLRL 676
           FL    +FF     +  +  F   F  F +  ++ L   +   H+L L
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFL 209


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 305 SWHLMAVSSLSPGAG 261
           SWH  ++  LSPGAG
Sbjct: 187 SWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 305 SWHLMAVSSLSPGAG 261
           SWH  ++  LSPGAG
Sbjct: 79  SWHTPSMYPLSPGAG 93


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +2

Query: 491 DSLH-PFWDWKKEINFLNVFDYFFVKIYTYFRYFSFALLFT-IFYVTFIYYLYNTFI 655
           + LH  F  WK     L  F Y F    ++++ F   +L   +    F ++ + T +
Sbjct: 51  EKLHFTFKSWKVLYTSLTSFGYLFCASLSFYKAFKIGILLNQLITPLFFFHSFMTSV 107


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 301 GTSWLSPHYLQVLGQSD 251
           G S +SPH + VL Q+D
Sbjct: 3   GVSVVSPHKINVLQQND 19


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 282 LIISRCWGKAI 250
           LI++ CWGK++
Sbjct: 9   LIVACCWGKSL 19


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 491 DSLHPFWDWKKEIN 532
           D+L P W W+ E N
Sbjct: 576 DALEPEWCWQNEEN 589


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 512 DWKKEINFLNVFDYFFVKIYTYFRYFSFALLFTIFYV--TFIYYLYNTF 652
           D+K  I  ++VF +FF+         SF  +F + +V  T   YL N F
Sbjct: 206 DFKSVIRSISVFSFFFMP--------SFVDIFRLTFVDKTASDYLINVF 246


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 350 MNPSSCFSFVIISQKSWHLM 291
           +NP +C SFVI  +K   L+
Sbjct: 206 INPKNCASFVIEVRKLSRLL 225


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +2

Query: 542 VFDYFFVK--IYTYFRYFSF--ALLFTIFYVTFIY 634
           +FDYF  +   Y Y++  S    + FT+F V   Y
Sbjct: 148 LFDYFVQRNQEYKYYQILSHLSGIFFTVFNVAQCY 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,397
Number of Sequences: 336
Number of extensions: 3394
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)