Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00466
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    33   1.3  
BC115411-1|AAI15412.1|  627|Homo sapiens ZNF264 protein protein.       30   8.9  
BC115410-1|AAI15411.2|  627|Homo sapiens zinc finger protein 264...    30   8.9  
AB007872-1|BAA24842.2|  720|Homo sapiens KIAA0412 protein.             30   8.9  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 533 FLNVFDYFFVKIYTYFRYFSFALLFTIFYVTFIYYLY 643
           F+ +F Y ++ +Y Y   + +  +FT  Y+    Y+Y
Sbjct: 18  FIYIFIYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIY 54



 Score = 32.3 bits (70), Expect = 1.7
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = +2

Query: 533 FLNVFDYFFVKIYTYFRYFSFALLFTIFYVTFIYYLY 643
           ++ ++ Y ++ +Y YF  F++  L+   Y+    Y+Y
Sbjct: 24  YIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIY 60



 Score = 31.1 bits (67), Expect = 3.8
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 533 FLNVFDYFFVKIYTYFRYFSFALLFTIFYVTFIYYLY 643
           F+ +F + ++ IY Y   + +  L+  FY+    YLY
Sbjct: 12  FMYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYIYLY 48


>BC115411-1|AAI15412.1|  627|Homo sapiens ZNF264 protein protein.
          Length = 627

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -1

Query: 196 CWMTMLFRSVIFHTGNIVFKLFYCSILNIRGSS 98
           CW T L R  I HTG   +K   C     R SS
Sbjct: 521 CWSTNLIRHAIIHTGEKPYKCSECGKAFSRSSS 553


>BC115410-1|AAI15411.2|  627|Homo sapiens zinc finger protein 264
           protein.
          Length = 627

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -1

Query: 196 CWMTMLFRSVIFHTGNIVFKLFYCSILNIRGSS 98
           CW T L R  I HTG   +K   C     R SS
Sbjct: 521 CWSTNLIRHAIIHTGEKPYKCSECGKAFSRSSS 553


>AB007872-1|BAA24842.2|  720|Homo sapiens KIAA0412 protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -1

Query: 196 CWMTMLFRSVIFHTGNIVFKLFYCSILNIRGSS 98
           CW T L R  I HTG   +K   C     R SS
Sbjct: 614 CWSTNLIRHAIIHTGEKPYKCSECGKAFSRSSS 646


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,329,734
Number of Sequences: 237096
Number of extensions: 2075568
Number of successful extensions: 4359
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4354
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)