Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00464
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   2.3  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   9.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.5  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 78  RVRNRKKDLDEIDQDLKEENAEKL 149
           RV   +KD  +I+QDL+E N + L
Sbjct: 411 RVTRIQKDARQIEQDLQERNRDGL 434


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 78  STAFLNVCRHNDISC 34
           +TAF+  C HN++ C
Sbjct: 219 TTAFVRRCLHNELRC 233


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 330 ATGVSKQQQNEKLFHK 377
           ATG  KQQQN    H+
Sbjct: 577 ATGAEKQQQNRSNHHR 592


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,550
Number of Sequences: 2352
Number of extensions: 13427
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)