Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00464
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL391650-8|CAI17137.1| 134|Homo sapiens zinc finger protein 593... 60 8e-09
D45213-1|BAA20369.1| 116|Homo sapiens zinc finger protein protein. 58 3e-08
BC019267-1|AAH19267.1| 116|Homo sapiens zinc finger protein 593... 58 3e-08
BC002580-1|AAH02580.1| 116|Homo sapiens zinc finger protein 593... 58 3e-08
BC126109-1|AAI26110.1| 550|Homo sapiens CCDC79 protein protein. 31 4.1
AK093213-1|BAC04098.1| 508|Homo sapiens protein ( Homo sapiens ... 31 4.1
DQ062813-1|AAY98515.1| 157|Homo sapiens GSTM4_SV5 protein. 30 7.2
U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein. 30 9.5
>AL391650-8|CAI17137.1| 134|Homo sapiens zinc finger protein 593
protein.
Length = 134
Score = 60.1 bits (139), Expect = 8e-09
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +3
Query: 63 LKKRWRVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQ 233
L ++ + + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID
Sbjct: 15 LARQMKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDST 74
Query: 234 ALNDHFKQK 260
L HF+ K
Sbjct: 75 NLKTHFRSK 83
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 230 TSFE*SFQAKVHKRRLKALELEPYTIEESERAAGHGSF 343
T+ + F++K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 74 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 111
>D45213-1|BAA20369.1| 116|Homo sapiens zinc finger protein protein.
Length = 116
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 78 RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 248
+ + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID L H
Sbjct: 2 KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61
Query: 249 FKQK 260
F+ K
Sbjct: 62 FRSK 65
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 230 TSFE*SFQAKVHKRRLKALELEPYTIEESERAAGHGSF 343
T+ + F++K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93
>BC019267-1|AAH19267.1| 116|Homo sapiens zinc finger protein 593
protein.
Length = 116
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 78 RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 248
+ + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID L H
Sbjct: 2 KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61
Query: 249 FKQK 260
F+ K
Sbjct: 62 FRSK 65
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 230 TSFE*SFQAKVHKRRLKALELEPYTIEESERAAGHGSF 343
T+ + F++K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93
>BC002580-1|AAH02580.1| 116|Homo sapiens zinc finger protein 593
protein.
Length = 116
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 78 RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 248
+ + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID L H
Sbjct: 2 KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61
Query: 249 FKQK 260
F+ K
Sbjct: 62 FRSK 65
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 230 TSFE*SFQAKVHKRRLKALELEPYTIEESERAAGHGSF 343
T+ + F++K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93
>BC126109-1|AAI26110.1| 550|Homo sapiens CCDC79 protein protein.
Length = 550
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 469 KLISTHCSKHETYCNPKKIFSSFHQWCQGNRKLCLC 576
+L T SKHE + K +F S+ W LC+C
Sbjct: 151 RLFRTVISKHELDLSDKNVFQSYQLWSSVCSTLCVC 186
>AK093213-1|BAC04098.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ35894 fis, clone TESTI2009390. ).
Length = 508
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 469 KLISTHCSKHETYCNPKKIFSSFHQWCQGNRKLCLC 576
+L T SKHE + K +F S+ W LC+C
Sbjct: 151 RLFRTVISKHELDLSDKNVFQSYQLWSSVCSTLCVC 186
>DQ062813-1|AAY98515.1| 157|Homo sapiens GSTM4_SV5 protein.
Length = 157
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 9 DQTDMTYKRKKYHCGDT--HLKKRWRVRNRKKDLDEIDQDLKEENAEKL 149
+ TD +Y+ KKY GD + + +W K LD ++ LK E E+L
Sbjct: 22 EYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNEKLKPEYLEEL 70
>U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.
Length = 1663
Score = 29.9 bits (64), Expect = 9.5
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 39 KYHCGDTHLKKRWRVRNRKKDLDEIDQ-DLKEENAEKL---LNQKVDLDLPGAAQHYCLH 206
K H HL + W VR K LD+ Q L E++AEK+ ++ +L L + +
Sbjct: 287 KLHSTRQHLHQMWHVRKLK--LDQCFQLRLFEQDAEKMFDWISHNKELFLQSHTEIGVSY 344
Query: 207 CARYFIDEQALNDHFKQKSIN 269
+Y +D Q ++HF S+N
Sbjct: 345 --QYALDLQTQHNHFAMNSMN 363
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,960,952
Number of Sequences: 237096
Number of extensions: 1621853
Number of successful extensions: 4813
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4809
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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