Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00464
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-17|CAB60500.1|  128|Caenorhabditis elegans Hypothetical...    70   1e-12
AF039048-3|AAK68334.1|  246|Caenorhabditis elegans Hypothetical ...    30   1.4  
AL110479-21|CAB54373.1|  462|Caenorhabditis elegans Hypothetical...    30   1.9  
Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z82280-6|CAB05267.2|  460|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81519-5|CAI46603.1|  590|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81519-4|CAB04218.1|  592|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL021492-7|CAE17999.1|  282|Caenorhabditis elegans Hypothetical ...    28   5.8  
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL117200-9|CAB60586.1|  807|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC006662-5|AAF39894.1|  501|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AL132860-17|CAB60500.1|  128|Caenorhabditis elegans Hypothetical
           protein Y56A3A.18 protein.
          Length = 128

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 30/55 (54%), Positives = 38/55 (69%)
 Frame = +3

Query: 96  KDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKQK 260
           KDLD+I +DLK E A KLL Q++D DLPG  Q YC+ C R+F+DE+    H K K
Sbjct: 21  KDLDQIHEDLKPEKAAKLLQQEIDYDLPGNGQFYCIECERHFVDEKTRQLHRKTK 75



 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 251 QAKVHKRRLKALELEPYTIEESERAAGHGSFKTAT 355
           + K+HK R+K L+  PYT  E+  A G G F   T
Sbjct: 73  KTKLHKNRVKTLKEVPYTQAEANAAGGSGFFPAIT 107


>AF039048-3|AAK68334.1|  246|Caenorhabditis elegans Hypothetical
           protein F16B4.6 protein.
          Length = 246

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 33  RKKYHCGDTHLKKRWRVRNRK-KDLDEIDQDLKEENAEKLLNQKV 164
           R+K H  +       + R R   DLD+I +DLK E A KLL ++V
Sbjct: 128 REKCHVEERKHTISNKARKRPGTDLDQIHEDLKPEKAAKLLQKEV 172


>AL110479-21|CAB54373.1|  462|Caenorhabditis elegans Hypothetical
           protein Y105C5B.25 protein.
          Length = 462

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 590 DFPEKFQNINNIKDDLKKRKYNYNFEK 670
           D+P+K++NI  ++ +L  +KYN   +K
Sbjct: 311 DYPDKYENIEQLEQELIFKKYNETVKK 337


>Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical
           protein C14B1.5 protein.
          Length = 396

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 599 EKFQNINNIKDDLKKRKYNYNFEKLEELWHV 691
           E+  N  N+K+DLK    NY FE  + +W +
Sbjct: 13  EEIANNPNLKEDLKILPSNYTFEVPKTIWKI 43


>Z82280-6|CAB05267.2|  460|Caenorhabditis elegans Hypothetical
           protein R05A10.6 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 566 YVYVTPYLDFPEKFQNINNIKDDLKKRKYN 655
           +V+V    DFP KF+N   ++ +L  +KYN
Sbjct: 301 HVHVIQNDDFPAKFENRTQLEKELIFKKYN 330


>Z81519-5|CAI46603.1|  590|Caenorhabditis elegans Hypothetical
           protein F29C12.1b protein.
          Length = 590

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 147 LLNQKVDLDLPGAAQHYCLHCARYFID 227
           LL+     DLP  A+  C+HCA  FID
Sbjct: 16  LLSTYTLADLPSCARAKCVHCAVDFID 42


>Z81519-4|CAB04218.1|  592|Caenorhabditis elegans Hypothetical
           protein F29C12.1a protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 147 LLNQKVDLDLPGAAQHYCLHCARYFID 227
           LL+     DLP  A+  C+HCA  FID
Sbjct: 16  LLSTYTLADLPSCARAKCVHCAVDFID 42


>AL021492-7|CAE17999.1|  282|Caenorhabditis elegans Hypothetical
           protein Y45F10D.14 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 608 QNINNIKDDLKKRKYNYNFEKLEELWHVYEELKQKR 715
           Q ++ ++D+L   KY YN +K+ E      + KQK+
Sbjct: 144 QALDQLEDELAAEKYKYNKQKIREKEEKERKEKQKQ 179


>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
            T20G5.1 protein.
          Length = 1681

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 48   CGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLH--CARYF 221
            C +  +K+       K D+DE+ +++++ N  KLLN  ++  +   A     H   A+ +
Sbjct: 826  CSEDAIKQLIINTRGKFDIDELVEEVEKRNRLKLLNHWLESKIQEGATDAATHNAMAKIY 885

Query: 222  IDEQALNDHFKQKS 263
            ID     + F +++
Sbjct: 886  IDSNNNPERFLKEN 899


>U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical
           protein C28G1.3 protein.
          Length = 817

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +2

Query: 521 RYSALFINGAKATENYVYVTPYLDFPEKFQNINNIKDDLKKRKYNYNFEKLEELWHVYEE 700
           RY  L  N   A +      P L+      N   +++ +  RKY    + LEEL H +  
Sbjct: 133 RYRKLMKNAKTAMDQIAVCLPVLE------NYAKLQEQMSNRKYYQALKTLEELEHTHLA 186

Query: 701 LKQK 712
           L +K
Sbjct: 187 LVEK 190


>AL117200-9|CAB60586.1|  807|Caenorhabditis elegans Hypothetical
           protein Y50E8A.16 protein.
          Length = 807

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 263 HKRRLKALELEPYTIEESERAAGHGSFKTATKRKIVSQNIEKSQTD-EDGDAILEE 427
           ++R  +  E    T  E+  A+ +G+  TAT     S     S TD ED DA+ +E
Sbjct: 152 YERLTENTETAANTNVENGTASTNGTASTATPTAATSSTSRSSSTDEEDNDAVSKE 207


>AC006662-5|AAF39894.1|  501|Caenorhabditis elegans Hypothetical
           protein H23L24.2 protein.
          Length = 501

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 132 ENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKQK 260
           EN E+  NQKV L L G      L CA     E+ L +  + +
Sbjct: 134 ENEEQNQNQKVILSLDGGGLRVVLQCAILLAVERELGEPLRNR 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,491,027
Number of Sequences: 27780
Number of extensions: 291850
Number of successful extensions: 1160
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)