Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00463
(635 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 186 2e-48
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 103 2e-23
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 103 2e-23
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 103 2e-23
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 103 2e-23
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 65 7e-12
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 37 0.003
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 36 0.006
SPACUNK4.17 |||NAD binding dehydrogenase family protein|Schizosa... 29 0.56
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 0.56
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 29 0.74
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 3.0
SPBC12C2.04 |||NAD binding dehydrogenase family protein|Schizosa... 26 5.2
SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulat... 25 6.9
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 25 9.1
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 25 9.1
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 25 9.1
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 9.1
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 186 bits (453), Expect = 2e-48
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVK+KIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (453), Expect = 2e-48
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVK+KIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 186 bits (453), Expect = 2e-48
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVK+KIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 171 bits (415), Expect = 9e-44
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVK+KIQDKEGIPPDQQR
Sbjct: 321 VESSDTIDNVKSKIQDKEGIPPDQQR 346
Score = 164 bits (399), Expect = 8e-42
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVK+KIQDKE
Sbjct: 89 ITLEVESSDTIDNVKSKIQDKE 110
Score = 164 bits (399), Expect = 8e-42
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVK+KIQDKE
Sbjct: 165 ITLEVESSDTIDNVKSKIQDKE 186
Score = 164 bits (399), Expect = 8e-42
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVK+KIQDKE
Sbjct: 241 ITLEVESSDTIDNVKSKIQDKE 262
Score = 164 bits (399), Expect = 8e-42
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVK+KIQDKE
Sbjct: 317 ITLEVESSDTIDNVKSKIQDKE 338
Score = 103 bits (247), Expect = 2e-23
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 99.5 bits (237), Expect = 4e-22
Identities = 53/85 (62%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 91.9 bits (218), Expect = 7e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 384
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 66.1 bits (154), Expect = 4e-12
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 34
Score = 45.2 bits (102), Expect = 8e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 348 IFAGKQLEDGRTLSDYNIQK 367
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 103 bits (247), Expect = 2e-23
Identities = 51/60 (85%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 187
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 91.9 bits (218), Expect = 7e-20
Identities = 45/56 (80%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 414
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 42
Score = 66.1 bits (154), Expect = 4e-12
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 34
Score = 45.2 bits (102), Expect = 8e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQK 63
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 103 bits (247), Expect = 2e-23
Identities = 51/60 (85%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 187
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 91.9 bits (218), Expect = 7e-20
Identities = 45/56 (80%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 414
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 42
Score = 66.1 bits (154), Expect = 4e-12
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 34
Score = 45.2 bits (102), Expect = 8e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQK 63
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 103 bits (247), Expect = 2e-23
Identities = 64/120 (53%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG K KT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----GKKRKKKT 84
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAP-CQTTTFKKNPHSILYC 367
T + + V+ + + SV L + + P C +TF N LYC
Sbjct: 85 YTTPKKIKHKHKKVELAVLKYYKVEDDGSVKRL-----RRECPNCGASTFMANHKDRLYC 139
Score = 91.1 bits (216), Expect = 1e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 42
Score = 66.1 bits (154), Expect = 4e-12
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 34
Score = 45.2 bits (102), Expect = 8e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQK 63
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 103 bits (247), Expect = 2e-23
Identities = 64/120 (53%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG K KT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----GKKRKKKT 84
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAP-CQTTTFKKNPHSILYC 367
T + + V+ + + SV L + + P C +TF N LYC
Sbjct: 85 YTTPKKIKHKHKKVELAVLKYYKVEDDGSVKRL-----RRECPNCGASTFMANHKDRLYC 139
Score = 91.1 bits (216), Expect = 1e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 42
Score = 66.1 bits (154), Expect = 4e-12
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 34
Score = 45.2 bits (102), Expect = 8e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQK 63
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 65.3 bits (152), Expect = 7e-12
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 29 RVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 58.0 bits (134), Expect = 1e-09
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 33 KEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 54.0 bits (124), Expect = 2e-08
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQR
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQR 42
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M I VKTLTGK I L+++ +D + +K ++++KE
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKE 34
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 32 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 145
I ++QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 39 IEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 372
I ++QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 39 IEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 35.5 bits (78), Expect = 0.006
Identities = 13/36 (36%), Positives = 27/36 (75%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 118
KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 30 KIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPACUNK4.17 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 29.1 bits (62), Expect = 0.56
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWK 534
VE D + A D++ IPP+++ P A+SWK
Sbjct: 265 VEWDDPSGKLNAMPVDEKTIPPEERIPRFTAASWK 299
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 29.1 bits (62), Expect = 0.56
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 303 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGH 446
G R V L ++H P + A+ +EN HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 28.7 bits (61), Expect = 0.74
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 409 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHTPSC 588
GK LE+E ++T +K ++ +PP++Q+ + K D + K T
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATLLM 69
Query: 589 MRLAG 603
M AG
Sbjct: 70 MGTAG 74
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 378 STKTQYKMECGFFLNV 331
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 151 STKTQYKMECGFFLNV 104
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
>SPBC12C2.04 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 475 DKEGIPPDQQRPSLLASSWK 534
D+E IP +++ P A+SWK
Sbjct: 260 DEESIPKEERIPRFTAASWK 279
>SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulatory
subunit Rpn11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 5 TRKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 115
T ++Q++ + P+Q R+ + GKQ D + D +QK
Sbjct: 255 TERVQNEVTLSPEQLRIQYVGKQ--DPKKHLDAEVQK 289
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 111 KKNPHSILYCVFVEAC 158
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 338 KKNPHSILYCVFVEAC 385
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 389
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 342 RIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGHNRECEGE 467
R+ P+ SW H DL E D+ H+ + +RE + +
Sbjct: 147 RVSHPNWAFVSWSHDDLNELVDKSYHNLHNAWSQLSREAKDQ 188
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 119 STLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEEFL 265
S + +L + + +VK + GKT L VE + +E KA + + +FL
Sbjct: 218 SYFYQLLMTKTPVVFYVKQMVGKTRQLAVEVHNHVEE-KALVDELLKFL 265
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.0 bits (52), Expect = 9.1
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Frame = +1
Query: 286 FAGKQLEDGRTLSDYNIQKESTLHL--VLRLRGGMQIFVKTLT-GKTITL-EVEASDTIE 453
F+ LE L I +S LHL V+ G + F K + G T TL ++ AS
Sbjct: 354 FSNNILEGLAELHRLGISHKS-LHLDNVVLFHSGHRTFAKLMDFGFTRTLRDMNASHPFN 412
Query: 454 NVKAKIQD--KEGI-PPDQQRPSLLASSWKTDAPC 549
I + EG+ PP+ S A+S KTD C
Sbjct: 413 INSQSITNILPEGLYPPEVSESSFAAASRKTDIWC 447
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,969,547
Number of Sequences: 5004
Number of extensions: 64906
Number of successful extensions: 271
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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