Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00463
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 188 4e-48
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 141 5e-34
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 89 4e-18
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 86 2e-17
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 47 1e-05
SB_51903| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5) 37 0.012
SB_5872| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5) 37 0.012
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.036
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_11589| Best HMM Match : DUF165 (HMM E-Value=4.6) 35 0.064
SB_922| Best HMM Match : DUF1532 (HMM E-Value=4.1) 35 0.064
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 33 0.15
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.19
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 32 0.45
SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 1.4
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_28743| Best HMM Match : PCI (HMM E-Value=0.00094) 29 2.4
SB_12423| Best HMM Match : Glypican (HMM E-Value=1.00053e-42) 29 2.4
SB_34920| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_38609| Best HMM Match : NAD_binding_5 (HMM E-Value=0) 29 4.2
SB_26232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_19200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 28 5.5
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 28 5.5
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 5.5
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 28 7.3
SB_5081| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 321 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 381 MQIFVKTLT 389
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 396
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 397 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 457 MQIFVKTLT 465
Score = 172 bits (419), Expect = 2e-43
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 413 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 472
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE SDTIENVKAKIQDKEGIPPDQQR
Sbjct: 473 VEPSDTIENVKAKIQDKEGIPPDQQR 498
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 89 ITLEVEPSDTIENVKAKIQDKE 110
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKE 186
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKE 262
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 317 ITLEVEPSDTIENVKAKIQDKE 338
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 393 ITLEVEPSDTIENVKAKIQDKE 414
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 409 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 468
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 469 ITLEVEPSDTIENVKAKIQDKE 490
Score = 102 bits (245), Expect = 2e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 485 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 101 bits (241), Expect = 6e-22
Identities = 55/85 (64%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 489 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 34
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 500 IFAGKQLEDGRTLSDYNIQK 519
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 188 bits (457), Expect = 4e-48
Identities = 97/129 (75%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE SDTIENVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 172 bits (419), Expect = 2e-43
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE SDTIENVKAKIQDKEGIPPDQQR
Sbjct: 321 VEPSDTIENVKAKIQDKEGIPPDQQR 346
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 89 ITLEVEPSDTIENVKAKIQDKE 110
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKE 186
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKE 262
Score = 166 bits (403), Expect = 2e-41
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE SDTIENVKAKIQDKE
Sbjct: 317 ITLEVEPSDTIENVKAKIQDKE 338
Score = 102 bits (245), Expect = 2e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 101 bits (241), Expect = 6e-22
Identities = 55/85 (64%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 34
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 348 IFAGKQLEDGRTLSDYNIQK 367
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 141 bits (341), Expect = 5e-34
Identities = 70/86 (81%), Positives = 76/86 (88%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI VK KT TL+
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISVKA-HWKTFTLD 91
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VEASDT+E+VK KIQ++EGIPP QR
Sbjct: 92 VEASDTVESVKEKIQNREGIPPKVQR 117
Score = 140 bits (339), Expect = 9e-34
Identities = 70/82 (85%), Positives = 75/82 (91%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI VK KT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISVKA-HWKT 87
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
TL+VEASDT+E+VK KIQ++E
Sbjct: 88 FTLDVEASDTVESVKEKIQNRE 109
Score = 92.3 bits (219), Expect = 3e-19
Identities = 51/82 (62%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVK 624
++ T +RL GGMQI VK
Sbjct: 61 IQKESTLHLVLRLRGGMQISVK 82
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 34
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 139
KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL L
Sbjct: 104 KIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 366
+ GIPP QRL++ ++L D R+L+DYNI++ S LHL L
Sbjct: 108 REGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 102 bits (245), Expect = 2e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 42
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 34
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQK 63
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 32 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 384
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 10 IFAGKQLEDGRTLSDYNIQK 29
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = +1
Query: 370 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 120
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 115
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 107 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
Score = 68.1 bits (159), Expect = 6e-12
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +2
Query: 143 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 112
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 342
+ GIPPDQQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 111 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTLSDYNIQK
Sbjct: 122 IFAGKQLEDGRTLSDYNIQK 141
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
I+ K G P DQQRL+F G+ L D T I +TLHL++RL GG
Sbjct: 101 IEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
G P DQQRL+F G+ L D T I +TLHL++RL GG
Sbjct: 106 GYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 388 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQR 507
I V TLTG+ I + ++ TI VK I+ K G P DQQR
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQR 113
>SB_51903| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5)
Length = 529
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ S+T+CV Q R+ + V + L + CV
Sbjct: 285 YQDGMASEDMRSKWPV-SYVTLSVTQCVNTFNVYQDSMASEDMRSKWLVSYVTLLVTQCV 343
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 344 TTFNVYQDGMASEDLRSKWPVSYVTLLVTQCVTTFNV 380
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 317 YQDSMASEDMRSKWLV-SYVTLLVTQCVTTFNVYQDGMASEDLRSKWPVSYVTLLVTQCV 375
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T M+C NV
Sbjct: 376 TTFNVYQDGMASEDMRSKWPVSYVTLLVMQCVTTFNV 412
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V+ + L + CV
Sbjct: 127 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDIRSKWPVIYVTLLVTQCV 185
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 186 TTFNVYQDGMASEDMRSKWPVSYVTLLVTQCVTTFNV 222
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 31 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTLLVTQCV 89
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 90 TTFNVYQDGMASEDMRSKWPVSYVTLLVTQCVTTFNV 126
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 63 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTLLVTQCV 121
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 122 TTFNVYQDGMASEDMRSKWPVSYVTLLVTQCVTTFNV 158
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 191 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDIRSKWPVSYVTLLVTQCV 249
Query: 441 RSFYFQSDGLSGQSFHEDLHAST 373
+F DG++ + H T
Sbjct: 250 TTFNVYQDGMASEDLKPHCHQFT 272
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V + +T+CV Q R+ + V + L + CV
Sbjct: 159 YQDGMASEDIRSKWPV-IYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTLLVTQCV 217
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 218 TTFNVYQDGMASEDIRSKWPVSYVTLLVTQCVTTFNV 254
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ + +CV Q R+ + V + L + CV
Sbjct: 381 YQDGMASEDMRSKWPV-SYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTLLVTQCV 439
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 440 TTFNVYQDGMASEDMRSKWLVSYVTLLVTQCVTTFNV 476
>SB_5872| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5)
Length = 529
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ S+T+CV Q R+ + V + L + CV
Sbjct: 285 YQDGMASEDMRSKWPV-SYVTLSVTQCVNTFNVYQDSMASEDMRSKWLVSYVTLLVTQCV 343
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 344 TTFNVYQDGMASEDLRSKWPVSYVTLLVTQCVTTFNV 380
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 317 YQDSMASEDMRSKWLV-SYVTLLVTQCVTTFNVYQDGMASEDLRSKWPVSYVTLLVTQCV 375
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T M+C NV
Sbjct: 376 TTFNVYQDGMASEDMRSKWPVSYVTLLVMQCVTTFNV 412
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V+ + L + CV
Sbjct: 127 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDIRSKWPVIYVTLLVTQCV 185
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 186 TTFNVYQDGMASEDMRSKWPVSYVTLLVTQCVTTFNV 222
Score = 31.5 bits (68), Expect = 0.59
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 31 YQDGMASEDMRSKWLV-SYVTLLVTQCVTTFNVYQDGMANEDMRSKWPVSYVTLLVTQCV 89
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 90 TTFNVYQDGMANEDMRSKWPVSYVTLLVTQCVTTFNV 126
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/97 (23%), Positives = 39/97 (40%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D A+ ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 63 YQDGMANEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMANEDMRSKWPVSYVTLLVTQCV 121
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 122 TTFNVYQDGMASEDMRSKWPVSYVTLLVTQCVTTFNV 158
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 191 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDIRSKWPVSYVTLLVTQCV 249
Query: 441 RSFYFQSDGLSGQSFHEDLHAST 373
+F DG++ + H T
Sbjct: 250 TTFNVYQDGMASEDLKPHCHQFT 272
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V + +T+CV Q R+ + V + L + CV
Sbjct: 159 YQDGMASEDIRSKWPV-IYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTLLVTQCV 217
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 218 TTFNVYQDGMASEDIRSKWPVSYVTLLVTQCVTTFNV 254
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ + +CV Q R+ + V + L + CV
Sbjct: 381 YQDGMASEDMRSKWPV-SYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTLLVTQCV 439
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 440 TTFNVYQDGMASEDMRSKWLVSYVTLLVTQCVTTFNV 476
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 23 KEGIPPDQQRLIFAGKQLEDGRTLSDYN 106
+EGIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYN 333
+ GIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 337 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQR 77
>SB_11589| Best HMM Match : DUF165 (HMM E-Value=4.6)
Length = 275
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 95 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTLLVTQCV 153
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T M+C NV
Sbjct: 154 TTFNVYQDGMASEDMRSKWPVSYVTLLVMQCVTTFNV 190
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 31 YQDGMASEDMRSKWPV-SYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTLLVTQCV 89
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 90 TTFNVYQDGMASEDMRSKWPVSYVTLLVTQCVTTFNV 126
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ + +CV Q R+ + V + L + CV
Sbjct: 159 YQDGMASEDMRSKWPV-SYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTLLVTQCV 217
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 218 TTFNVYQDGMASEDMRSKWLVSYVTLLVTQCVTTFNV 254
>SB_922| Best HMM Match : DUF1532 (HMM E-Value=4.1)
Length = 294
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ +T+CV Q R+ + V + L + CV
Sbjct: 24 YQDSMASEDMRSKWLV-SYVTLLVTQCVTTFNVYQDGMASEDLRSKWPVSYVTLLVTQCV 82
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T M+C NV
Sbjct: 83 TTFNVYQDGMASEDMRSKWPVSYVTLLVMQCVTTFNV 119
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/86 (24%), Positives = 35/86 (40%)
Frame = -3
Query: 588 TRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCVRSFYFQSDGLS 409
++W V S+ S+T+CV Q R+ + V + L + CV +F DG++
Sbjct: 3 SKWPV-SYVTLSVTQCVNTFNVYQDSMASEDMRSKWLVSYVTLLVTQCVTTFNVYQDGMA 61
Query: 408 GQSFHEDLHASTKTQYKMECGFFLNV 331
+ S T +C NV
Sbjct: 62 SEDLRSKWPVSYVTLLVTQCVTTFNV 87
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -3
Query: 621 YEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQQRWTLLIRRNSFFVLDLRLHILDCV 442
Y+D AS ++W V S+ + +CV Q R+ + V + L + CV
Sbjct: 88 YQDGMASEDMRSKWPV-SYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTLLVTQCV 146
Query: 441 RSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFLNV 331
+F DG++ + S T +C NV
Sbjct: 147 TTFNVYQDGMASEDMRSKWLVSYVTLLVTQCVTTFNV 183
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 483
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 115
+I+ K GIP D QRL F K+L D TL+ N+++
Sbjct: 35 RIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 342
GIP D QRL F K+L D TL+ N+++
Sbjct: 41 GIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 29 GIPPDQQRLIFAGKQLEDGRTLSDYN 106
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLEDGRTLSDYN 333
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 23 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 121
K+ P +LI+AGK L D L +YNI ++S
Sbjct: 102 KDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
Score = 31.5 bits (68), Expect = 0.59
Identities = 25/106 (23%), Positives = 44/106 (41%)
Frame = +1
Query: 241 DPRQRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 420
D + P +LI+AGK L D L +YNI ++S +V+ +
Sbjct: 99 DKGKDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS--FVVIMVAKPKPAPAAVAPAPVT 156
Query: 421 TLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTT 558
T +A+ + +A +E P+ + ++S +T A TT
Sbjct: 157 TTIPQAATASPSTQASSTAQEDSKPEAKPDEAKSTSTETAASATTT 202
>SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 306 FQLLASKDETLLIRRNSS-LSWIF-AFTFSIVSDASTSKVMVFPVRVFTKIC 157
+ L+ SK I + + + WIF A SI+SD K++VFP +F +C
Sbjct: 243 WDLVCSKSMYATIANSITFILWIFGAMAGSIISDKFGRKIVVFPCVIFASLC 294
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 116 ESTLHLVLRLRGGM 157
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 343 ESTLHLVLRLRGGM 384
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 116 ESTLHLVLRLRGGM 157
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 343 ESTLHLVLRLRGGM 384
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +1
Query: 283 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GKTITLEVEASDTIENV 459
+ + + R L + ++ TLHLV LRG I +T + G++ V A I
Sbjct: 326 VVGSRHFDVARMLREVDVTGTITLHLVEPLRGFGAIGPRTASRGQSTEEPVNAEKKIGTG 385
Query: 460 KAKIQDKEGIPP---DQQRPSLLAS----SWKTDAPC 549
KA ++ K PP + P+L+AS +W++ C
Sbjct: 386 KATLRLKAKGPPVVEEITEPTLIASCIFQAWESTWEC 422
>SB_28743| Best HMM Match : PCI (HMM E-Value=0.00094)
Length = 322
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 415 TITLEVEASDTIENVKAKIQDKEG---IPPDQQRPSLLASSWKTDAPCQ 552
TIT E+ D E+ ++ D G +PP QQR +LA+ +K D CQ
Sbjct: 108 TITQEILDDDESEDRFEEVLDTSGPIELPPCQQRSRMLANLYK-DERCQ 155
>SB_12423| Best HMM Match : Glypican (HMM E-Value=1.00053e-42)
Length = 737
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +2
Query: 164 FVKTLTGKTITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKK 343
FV TL TI LE +IENV I K F ++N S K + C T T K
Sbjct: 456 FVSTLLEATIQLE--GPFSIENVIVPIGVKISFAIMNYQEKNTVVSQKIFSGCGTPTLSK 513
Query: 344 NPHS 355
+ S
Sbjct: 514 SKRS 517
>SB_34920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Frame = +2
Query: 71 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 250
+L D L I + HL L L +Q+FVK + + + T EN++ D
Sbjct: 145 ELGDISLLDTRGISSDRHSHLKLILPCLIQVFVKEMAFRCSKFFASSFHTFENLRRISSD 204
Query: 251 KEEF------LLINSVSSLLASSWKT 310
+ F L N +S ASS+ T
Sbjct: 205 RHSFSRAYYKYLKNRISKFFASSFHT 230
>SB_38609| Best HMM Match : NAD_binding_5 (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 215 DTIENVKAKIQDKEEFLLINSVSSLLA 295
+ E +K K+ D+EEF NSV S+L+
Sbjct: 508 EVCERIKFKVNDEEEFQNFNSVLSILS 534
>SB_26232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 127 PSCTASSWRHADLRKNSDRKD-HHFGSR--SIRHN 222
P+CT+ RH D+R+NS R+ G+R +RHN
Sbjct: 2 PTCTSFGNRHEDVRRNSARRSCASPGNRHEDVRHN 36
>SB_19200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 852
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 215 DTIENVKAKIQDKEEFLLINSVSSLLA 295
+ E +K K+ D+EEF NSV S+L+
Sbjct: 374 EVCERIKFKVNDEEEFQNFNSVLSILS 400
>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
Length = 432
Score = 28.3 bits (60), Expect = 5.5
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Frame = +1
Query: 115 RIHTPSCTASSWRHADLRKNSDRKDHHFGSRSIRHN*ECEGEDPRQR-----GIPPDQQR 279
R H + +S R D K+ K+ R RH E G+ R+R P D +R
Sbjct: 145 RRHEKNGESSRIRSGDREKSDREKEREKERRRRRHEDEGSGDRRRERRDKDAHDPEDPKR 204
Query: 280 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 459
K+ R+ D K+S L R+R + ++TL K VE DT ++
Sbjct: 205 REKDDKKKSRERSKGDEEHTKDSKLDEEDRIRRREKELLETL--KQEEEAVEEEDTKQSS 262
Query: 460 KAKI 471
K I
Sbjct: 263 KPSI 266
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 324 RLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGHNRECEGEDPRQR 482
R S+R H+PS +S R D R+ DR+ R +R+ + + R R
Sbjct: 78 RRDSSRRSHSPSRRSSDDRSTDARDRRDRRRSSSRERRPPRDRDRDRDRDRDR 130
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 324 RLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGHNRECEGEDPRQR 482
R S+R H+PS +S R D R+ DR+ R +R+ + + R R
Sbjct: 78 RRDSSRRSHSPSRRSSDDRSTDARDRRDRRRSSSRERRPPRDRDRDRDRDRDR 130
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 265 PDQQRLIFAGKQLEDGRTLSDY--NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEA 438
PD ++ I G L+DG+T+ D + ++E L+ ++ G + L + L E
Sbjct: 538 PDSKKNILEGLDLQDGKTVEDLLSDYRRELELYRQIKDENGTVSRIVNLEKQVNDLSGEN 597
Query: 439 SDTIENVKAKIQDKEG 486
S +++ ++DK G
Sbjct: 598 S-SLKTTMGDVKDKVG 612
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 27.9 bits (59), Expect = 7.3
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GK 187
+ +K G+ RL+ GK++ D L DYNI T+ L G F+K T G+
Sbjct: 94 VTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIR--LETWNGWADFLKAATKGQ 151
Query: 188 -TITLEVEASDTIENVKAKIQDK 253
T TL+ S + + + AK Q +
Sbjct: 152 LTPTLKHMLSISEDPLVAKYQQR 174
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHS 355
+ +E E + I+ + KIQ +E L+++ V ++ + D PC T PHS
Sbjct: 786 MAVEQERFEVIDKQRQKIQ--KELLMLSGVPNIQGLAEVIDRPCGGTHTLSFPHS 838
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 12 RSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHS 128
R K +KE L+++ V ++ + D PC T PHS
Sbjct: 800 RQKIQKELLMLSGVPNIQGLAEVIDRPCGGTHTLSFPHS 838
>SB_5081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Frame = +2
Query: 107 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEEF------LL 268
I + HL L L +Q+FVK + + + T EN++ D+ F L
Sbjct: 14 ISSDRHSHLKLILPCLIQVFVKEMAFQCSKFFASSFHTFENLRRISSDRHSFSRVYYKYL 73
Query: 269 INSVSSLLASSWKTDAPCQTTTFKKNPHSILY 364
N +S ASS+ T Q + ++ S Y
Sbjct: 74 SNRISKFFASSFHTFENLQRISSDRHSFSRAY 105
>SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 300 AGRRTHLVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGHNRECEGEDPR 476
AG R + I P T +W R +SDR G+R G R+ +G+ R
Sbjct: 308 AGLCAEKYRSREEIDIEKPKETRRTWEELTARPSSDRFIPRAGNRVNGFKRQLQGKAKR 366
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,836,656
Number of Sequences: 59808
Number of extensions: 514554
Number of successful extensions: 1729
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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