Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00463
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 189 2e-48
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 189 2e-48
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 189 2e-48
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 189 2e-48
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 189 2e-48
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 188 4e-48
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 186 1e-47
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 186 1e-47
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 186 1e-47
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 186 1e-47
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 186 1e-47
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 186 1e-47
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 186 1e-47
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 176 1e-44
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 174 5e-44
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 163 7e-41
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 140 5e-34
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 140 5e-34
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 102 2e-22
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 101 3e-22
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 101 3e-22
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 101 4e-22
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 101 4e-22
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 77 1e-14
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 68 5e-12
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 64 7e-11
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 53 2e-07
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 53 2e-07
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 51 6e-07
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 50 2e-06
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 50 2e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 44 8e-05
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 42 3e-04
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 42 3e-04
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 41 8e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 40 0.002
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 38 0.004
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 38 0.007
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 36 0.023
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 35 0.039
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 34 0.069
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 34 0.069
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 34 0.091
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 33 0.16
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 33 0.16
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 33 0.21
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 33 0.21
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 33 0.21
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 33 0.21
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 32 0.28
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 32 0.28
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 32 0.37
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 32 0.37
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 32 0.37
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 31 0.64
At5g49100.1 68418.m06078 expressed protein 31 0.85
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.85
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 30 1.5
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 30 1.5
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 29 2.0
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 29 2.6
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 29 2.6
At2g17110.1 68415.m01974 expressed protein 29 2.6
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 29 2.6
At5g16280.1 68418.m01901 expressed protein 29 3.4
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 28 4.5
At4g29370.1 68417.m04196 kelch repeat-containing F-box family pr... 27 7.9
At4g25840.1 68417.m03717 haloacid dehalogenase-like hydrolase fa... 27 7.9
At2g15680.1 68415.m01795 calmodulin-related protein, putative si... 27 7.9
At1g26370.1 68414.m03217 RNA helicase, putative similar to SP|Q1... 27 7.9
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 189 bits (460), Expect = 2e-48
Identities = 97/127 (76%), Positives = 106/127 (83%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCV 370
ITLEVE+SDTI+NVKAKIQDKE FL +SVSS L SS + D TTT +++ CV
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 300
Query: 371 FVEACRS 391
FV +S
Sbjct: 301 FVVVSKS 307
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 161 bits (392), Expect = 3e-40
Identities = 85/116 (73%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKR--IHTPSCM 591
VE+SDTI+NVKAKIQDKE S L SS + D TTT +R + T SC+
Sbjct: 245 VESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 300
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 RGRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 164
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 189 bits (460), Expect = 2e-48
Identities = 97/127 (76%), Positives = 106/127 (83%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCV 370
ITLEVE+SDTI+NVKAKIQDKE FL +SVSS L SS + D TTT +++ CV
Sbjct: 393 ITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 452
Query: 371 FVEACRS 391
FV +S
Sbjct: 453 FVVVSKS 459
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 321 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 381 MQIFVKTLT 389
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKE 338
Score = 161 bits (392), Expect = 3e-40
Identities = 85/116 (73%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 396
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKR--IHTPSCM 591
VE+SDTI+NVKAKIQDKE S L SS + D TTT +R + T SC+
Sbjct: 397 VESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 452
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 RGRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 164
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 189 bits (460), Expect = 2e-48
Identities = 97/127 (76%), Positives = 106/127 (83%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCV 370
ITLEVE+SDTI+NVKAKIQDKE FL +SVSS L SS + D TTT +++ CV
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 376
Query: 371 FVEACRS 391
FV +S
Sbjct: 377 FVVVSKS 383
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 161 bits (392), Expect = 3e-40
Identities = 85/116 (73%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKR--IHTPSCM 591
VE+SDTI+NVKAKIQDKE S L SS + D TTT +R + T SC+
Sbjct: 321 VESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 376
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 RGRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 164
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 189 bits (460), Expect = 2e-48
Identities = 97/127 (76%), Positives = 106/127 (83%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCV 370
ITLEVE+SDTI+NVKAKIQDKE FL +SVSS L SS + D TTT +++ CV
Sbjct: 393 ITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 452
Query: 371 FVEACRS 391
FV +S
Sbjct: 453 FVVVSKS 459
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 321 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 381 MQIFVKTLT 389
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKE 338
Score = 161 bits (392), Expect = 3e-40
Identities = 85/116 (73%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 396
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKR--IHTPSCM 591
VE+SDTI+NVKAKIQDKE S L SS + D TTT +R + T SC+
Sbjct: 397 VESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 452
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 RGRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 164
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 189 bits (460), Expect = 2e-48
Identities = 97/127 (76%), Positives = 106/127 (83%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCV 370
ITLEVE+SDTI+NVKAKIQDKE FL +SVSS L SS + D TTT +++ CV
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 376
Query: 371 FVEACRS 391
FV +S
Sbjct: 377 FVVVSKS 383
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 161 bits (392), Expect = 3e-40
Identities = 85/116 (73%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKR--IHTPSCM 591
VE+SDTI+NVKAKIQDKE S L SS + D TTT +R + T SC+
Sbjct: 321 VESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 376
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 RGRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 164
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 188 bits (457), Expect = 4e-48
Identities = 95/128 (74%), Positives = 101/128 (78%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHTPSCMRLAGGM 609
VE+SDTI+NVKAKIQDKEGIPPDQQR + K +RL GGM
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHLVLRLRGGM 152
Query: 610 QIFVKTLT 633
QIFVKTLT
Sbjct: 153 QIFVKTLT 160
Score = 175 bits (426), Expect = 2e-44
Identities = 93/129 (72%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 167
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKE IPPDQQR + ++ T +RL GG
Sbjct: 168 VESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 228 MQIFVKTLT 236
Score = 165 bits (401), Expect = 2e-41
Identities = 79/83 (95%), Positives = 82/83 (98%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEA 438
IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+
Sbjct: 187 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 246
Query: 439 SDTIENVKAKIQDKEGIPPDQQR 507
S TI+NVKAKIQDKEGIPPDQQR
Sbjct: 247 SGTIDNVKAKIQDKEGIPPDQQR 269
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 158 bits (384), Expect = 2e-39
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 180 KIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 239
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+S TI+NVKAKIQDKE
Sbjct: 240 ITLEVESSGTIDNVKAKIQDKE 261
Score = 157 bits (381), Expect = 6e-39
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKT 163
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 164 ITLEVESSDTIDNVKAKIQDKE 185
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDG 85
KIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 256 KIQDKEGIPPDQQRLIFAGKQLEGG 280
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDG 312
+ GIPPDQQRLIFAGKQLE G
Sbjct: 260 KEGIPPDQQRLIFAGKQLEGG 280
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 305 MQIFVKTLT 313
Score = 171 bits (415), Expect = 4e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 320
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 321 VESSDTIDNVKAKIQDKEGIPPDQQR 346
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKE 338
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 337 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 348 IFAGKQLEDGRTLADYNIQK 367
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 171 bits (415), Expect = 4e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQR 270
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 272 IFAGKQLEDGRTLADYNIQK 291
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 171 bits (415), Expect = 4e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQR 270
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 272 IFAGKQLEDGRTLADYNIQK 291
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 171 bits (415), Expect = 4e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQR 194
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 196 IFAGKQLEDGRTLADYNIQK 215
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 171 bits (415), Expect = 4e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQR 270
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 272 IFAGKQLEDGRTLADYNIQK 291
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 171 bits (415), Expect = 4e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQR 194
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 196 IFAGKQLEDGRTLADYNIQK 215
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 93 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 153 MQIFVKTLT 161
Score = 186 bits (452), Expect = 1e-47
Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDTI+NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Query: 607 MQIFVKTLT 633
MQIFVKTLT
Sbjct: 229 MQIFVKTLT 237
Score = 171 bits (415), Expect = 4e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQR 270
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKE 110
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKE 262
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 100 bits (239), Expect = 9e-22
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFVKTLT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 272 IFAGKQLEDGRTLADYNIQK 291
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 176 bits (428), Expect = 1e-44
Identities = 88/127 (69%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 435
GIPPDQ RLIFAGKQLEDGRTL+DYN+Q++STLHL+LR RGGMQIFVKTLTGKTITLEVE
Sbjct: 35 GIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVE 94
Query: 436 ASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGGMQ 612
+SDTI+N+KAKIQDKEGIPPDQQR + ++ T +RL GGMQ
Sbjct: 95 SSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 154
Query: 613 IFVKTLT 633
IFVKTLT
Sbjct: 155 IFVKTLT 161
Score = 167 bits (407), Expect = 4e-42
Identities = 80/86 (93%), Positives = 84/86 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKEGI PDQQR
Sbjct: 169 VESSDTIDNVKAKIQDKEGISPDQQR 194
Score = 164 bits (399), Expect = 4e-41
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKE 186
Score = 152 bits (368), Expect = 2e-37
Identities = 71/82 (86%), Positives = 79/82 (96%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN+Q++STLHL+LR RGGMQIFVKTLTGKT
Sbjct: 29 KIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGGMQIFVKTLTGKT 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+N+KAKIQDKE
Sbjct: 89 ITLEVESSDTIDNLKAKIQDKE 110
Score = 95.5 bits (227), Expect = 3e-20
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGI PDQQRLIFAGKQ EDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 86.6 bits (205), Expect = 1e-17
Identities = 50/87 (57%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR---PSLLASSWKTDAPCQ 552
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ R +T A
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 553 TTTFKRIHTPSCMRLAGGMQIFVKTLT 633
+H +R GGMQIFVKTLT
Sbjct: 61 VQEDSTLHL--LLRFRGGMQIFVKTLT 85
Score = 83.8 bits (198), Expect = 9e-17
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GI PDQQRLIFAGKQ EDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 185 KEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD E
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIE 34
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQ EDGRTL+DYNIQK
Sbjct: 196 IFAGKQHEDGRTLADYNIQK 215
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 174 bits (423), Expect = 5e-44
Identities = 88/129 (68%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ G+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVLRLRGGMQIFV+TLT KTI LE
Sbjct: 111 KEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALE 170
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
VE+SDT +NVKAKIQDKEGIPPDQQR + ++ T +RL GG
Sbjct: 171 VESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Query: 607 MQIFVKTLT 633
MQIFV TLT
Sbjct: 231 MQIFVNTLT 239
Score = 166 bits (404), Expect = 9e-42
Identities = 85/127 (66%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 435
GIP DQQRLIF+GK L+DGRTL+DY+IQK+S LHL LRLRGGMQIFVKTLTGKTITLEVE
Sbjct: 37 GIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVE 96
Query: 436 ASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGGMQ 612
+SDTI+NVKAKIQDKEG+PPDQQR ++ T +RL GGMQ
Sbjct: 97 SSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQ 156
Query: 613 IFVKTLT 633
IFV+TLT
Sbjct: 157 IFVRTLT 163
Score = 159 bits (386), Expect = 1e-39
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV TLTGKT
Sbjct: 183 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKT 242
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 243 ITLEVESSDTIDNVKAKIQDKE 264
Score = 159 bits (386), Expect = 1e-39
Identities = 77/86 (89%), Positives = 81/86 (94%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV TLTGKTITLE
Sbjct: 187 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLE 246
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
VE+SDTI+NVKAKIQDKE I PDQQR
Sbjct: 247 VESSDTIDNVKAKIQDKERIQPDQQR 272
Score = 154 bits (374), Expect = 4e-38
Identities = 73/82 (89%), Positives = 79/82 (96%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVLRLRGGMQIFV+TLT KT
Sbjct: 107 KIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKT 166
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
I LEVE+SDT +NVKAKIQDKE
Sbjct: 167 IALEVESSDTTDNVKAKIQDKE 188
Score = 144 bits (350), Expect = 3e-35
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQD EGIP DQQRLIF+GK L+DGRTL+DY+IQK+S LHL LRLRGGMQIFVKTLTGKT
Sbjct: 31 KIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQIFVKTLTGKT 90
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
ITLEVE+SDTI+NVKAKIQDKE
Sbjct: 91 ITLEVESSDTIDNVKAKIQDKE 112
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/49 (87%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 154
KIQDKE I PDQQRLIFAG+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 259 KIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 80.6 bits (190), Expect = 8e-16
Identities = 49/87 (56%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR---PSLLASSWKTDAPCQ 552
MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQR L +T A
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 553 TTTFKRIHTPSCMRLAGGMQIFVKTLT 633
+H +RL GGMQIFVKTLT
Sbjct: 63 IQKDSILHL--ALRLRGGMQIFVKTLT 87
Score = 74.9 bits (176), Expect = 4e-14
Identities = 37/42 (88%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGR-TLSDYNIQKESTLHLVLRLRGG 381
I PDQQRLIFAG+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 266 IQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 50.8 bits (116), Expect = 7e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQI KTLT KTIT++V +SDTI NVKAKIQD E
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIE 36
Score = 35.1 bits (77), Expect = 0.039
Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = +3
Query: 510 IFAGKQLEDG-RTLSDYNIQK 569
IFAG+QLEDG TL+DYNIQK
Sbjct: 274 IFAGEQLEDGYYTLADYNIQK 294
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 163 bits (397), Expect = 7e-41
Identities = 86/129 (66%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIP DQQRLIFAGKQLEDG TL+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLE
Sbjct: 35 KEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFVQTLTGKTITLE 94
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHT-PSCMRLAGG 606
V++SDTI+NVKAKIQDKEGI P QQR + ++ T +RL GG
Sbjct: 95 VKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Query: 607 MQIFVKTLT 633
MQIFV T +
Sbjct: 155 MQIFVSTFS 163
Score = 153 bits (371), Expect = 9e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQ+KEGIP DQQRLIFAGKQLEDG TL+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKT
Sbjct: 31 KIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFVQTLTGKT 90
Query: 191 ITLEVEASDTIENVKAKIQDKEEFL 265
ITLEV++SDTI+NVKAKIQDKE L
Sbjct: 91 ITLEVKSSDTIDNVKAKIQDKEGIL 115
Score = 143 bits (347), Expect = 8e-35
Identities = 82/135 (60%), Positives = 94/135 (69%), Gaps = 8/135 (5%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK----- 414
+ GI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV T +GK
Sbjct: 111 KEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSD 170
Query: 415 TITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFK-RIHTPSC- 588
T+TL+VE+SDTIENVKAKIQD+EG+ PD QR T+ + R + C
Sbjct: 171 TLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCL 230
Query: 589 -MRLAGGMQIFVKTL 630
+RL G M IFVK L
Sbjct: 231 ALRLRGDMYIFVKNL 245
Score = 138 bits (335), Expect = 2e-33
Identities = 71/87 (81%), Positives = 77/87 (88%), Gaps = 5/87 (5%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK- 187
KIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV T +GK
Sbjct: 107 KIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKN 166
Query: 188 ----TITLEVEASDTIENVKAKIQDKE 256
T+TL+VE+SDTIENVKAKIQD+E
Sbjct: 167 FTSDTLTLKVESSDTIENVKAKIQDRE 193
Score = 127 bits (306), Expect = 7e-30
Identities = 71/122 (58%), Positives = 79/122 (64%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEA 438
IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R GMQIFVKTLT K I LEVE+
Sbjct: 278 IPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVES 337
Query: 439 SDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHTPSCMRLAGGMQIF 618
DTIENVKA +QDKEGI P L+ + C + I S + L GMQIF
Sbjct: 338 WDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYS-IQKESTLHLVLGMQIF 396
Query: 619 VK 624
VK
Sbjct: 397 VK 398
Score = 125 bits (302), Expect = 2e-29
Identities = 77/137 (56%), Positives = 87/137 (63%), Gaps = 11/137 (8%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-------TGK 414
G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT T K
Sbjct: 427 GSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCK 486
Query: 415 TITLEVEASDTIENVKAKIQDKEGIPPDQQR----PSLLASSWKTDAPCQTTTFKRIHTP 582
TITLEVE+SDTI+NVK KIQ K GIP D+QR +L S +T IH
Sbjct: 487 TITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS-RTLLDYNIQKGSTIHQL 545
Query: 583 SCMRLAGGMQIFVKTLT 633
R GGMQIF+KTLT
Sbjct: 546 FLQR--GGMQIFIKTLT 560
Score = 121 bits (291), Expect = 5e-28
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 435
GIP D+QRLIF G+ L RTL DYNIQK ST+H + RGGMQIF+KTLTGKTI LEVE
Sbjct: 510 GIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVE 569
Query: 436 ASDTIENVKAKIQDKEGIPPDQQ 504
+SDTI NVK KIQ KEGI PDQQ
Sbjct: 570 SSDTIANVKEKIQVKEGIKPDQQ 592
Score = 119 bits (287), Expect = 1e-27
Identities = 61/82 (74%), Positives = 66/82 (80%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
K+QDKE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R GMQIFVKTLT K
Sbjct: 271 KLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKR 330
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
I LEVE+ DTIENVKA +QDKE
Sbjct: 331 INLEVESWDTIENVKAMVQDKE 352
Score = 114 bits (275), Expect = 4e-26
Identities = 60/88 (68%), Positives = 66/88 (75%), Gaps = 7/88 (7%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL---- 178
KIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT
Sbjct: 421 KIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSG 480
Query: 179 ---TGKTITLEVEASDTIENVKAKIQDK 253
T KTITLEVE+SDTI+NVK KIQ K
Sbjct: 481 ETPTCKTITLEVESSDTIDNVKVKIQHK 508
Score = 114 bits (275), Expect = 4e-26
Identities = 58/82 (70%), Positives = 64/82 (78%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H + RGGMQIF+KTLTGKT
Sbjct: 504 KIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKT 563
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
I LEVE+SDTI NVK KIQ KE
Sbjct: 564 IILEVESSDTIANVKEKIQVKE 585
Score = 114 bits (274), Expect = 5e-26
Identities = 67/124 (54%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
Frame = +1
Query: 265 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 444
P+ QRLIF GK+L+DG TL+DY+IQKESTLHLVL GMQIFVK GK ITLEV +SD
Sbjct: 358 PNLQRLIFLGKELKDGCTLADYSIQKESTLHLVL----GMQIFVKLFGGKIITLEVLSSD 413
Query: 445 TIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHTPSC-MRLAGGMQIFV 621
TI++VKAKIQDK G PPDQQ + + T + GMQIFV
Sbjct: 414 TIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFV 473
Query: 622 KTLT 633
KT +
Sbjct: 474 KTFS 477
Score = 110 bits (265), Expect = 7e-25
Identities = 72/139 (51%), Positives = 85/139 (61%), Gaps = 11/139 (7%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----T 408
+ G+ PD QRLIF G++L ED RTL+DY I+ STL L LRLRG M IFVK L T
Sbjct: 192 REGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFT 251
Query: 409 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTTFKRIHTPSC 588
G+ LEVE+SDTI+NVKAK+QDKE IP D R L + K +T I S
Sbjct: 252 GENFILEVESSDTIDNVKAKLQDKERIPMDLHR---LIFAGKPLEGGRTLAHYNIQKGST 308
Query: 589 M----RLAGGMQIFVKTLT 633
+ R GMQIFVKTLT
Sbjct: 309 LYLVTRFRCGMQIFVKTLT 327
Score = 107 bits (256), Expect = 8e-24
Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 IQDKEGIPPDQ--QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+QDKEGI P QRLIF GK+L+DG TL+DY+IQKESTLHLVL GMQIFVK GK
Sbjct: 348 VQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVL----GMQIFVKLFGGK 403
Query: 188 TITLEVEASDTIENVKAKIQDK 253
ITLEV +SDTI++VKAKIQDK
Sbjct: 404 IITLEVLSSDTIKSVKAKIQDK 425
Score = 106 bits (255), Expect = 1e-23
Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-- 178
KIQD+EG+ PD QRLIF G++L ED RTL+DY I+ STL L LRLRG M IFVK L
Sbjct: 188 KIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPY 247
Query: 179 ---TGKTITLEVEASDTIENVKAKIQDKE 256
TG+ LEVE+SDTI+NVKAK+QDKE
Sbjct: 248 NSFTGENFILEVESSDTIDNVKAKLQDKE 276
Score = 81.0 bits (191), Expect = 6e-16
Identities = 45/85 (52%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQR +
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GGMQIFV+TLT
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLT 87
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 148
KIQ KEGI PDQQ LIF G+QLEDG TL DY+I K+STL+LVLRLR
Sbjct: 580 KIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 375
+ GI PDQQ LIF G+QLEDG TL DY+I K+STL+LVLRLR
Sbjct: 584 KEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KE
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKE 36
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQKNPHSILY 590
IF G+QLEDG TL DY+I K S LY
Sbjct: 595 IFFGQQLEDGVTLGDYDIHKK--STLY 619
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 140 bits (340), Expect = 5e-34
Identities = 64/86 (74%), Positives = 76/86 (88%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTGK I ++
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEID 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
+E +DTI+ +K ++++KEGIPP QQR
Sbjct: 93 IEPTDTIDRIKERVEEKEGIPPVQQR 118
Score = 138 bits (333), Expect = 4e-33
Identities = 63/82 (76%), Positives = 74/82 (90%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTGK
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKE 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
I +++E +DTI+ +K ++++KE
Sbjct: 89 IEIDIEPTDTIDRIKERVEEKE 110
Score = 92.3 bits (219), Expect = 2e-19
Identities = 51/85 (60%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GG I VKTLT
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT 85
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+
Sbjct: 105 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 153
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 384
+ GIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+
Sbjct: 109 KEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 153
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQ 566
I+AGKQL D +T DY I+
Sbjct: 120 IYAGKQLADDKTAKDYAIE 138
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 140 bits (340), Expect = 5e-34
Identities = 64/86 (74%), Positives = 76/86 (88%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTGK I ++
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEID 92
Query: 430 VEASDTIENVKAKIQDKEGIPPDQQR 507
+E +DTI+ +K ++++KEGIPP QQR
Sbjct: 93 IEPTDTIDRIKERVEEKEGIPPVQQR 118
Score = 138 bits (333), Expect = 4e-33
Identities = 63/82 (76%), Positives = 74/82 (90%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTGK
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKE 88
Query: 191 ITLEVEASDTIENVKAKIQDKE 256
I +++E +DTI+ +K ++++KE
Sbjct: 89 IEIDIEPTDTIDRIKERVEEKE 110
Score = 92.3 bits (219), Expect = 2e-19
Identities = 51/85 (60%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 562 FKRIHT-PSCMRLAGGMQIFVKTLT 633
++ T +RL GG I VKTLT
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT 85
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 105 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 109 KEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQ 566
I+AGKQL D +T DYNI+
Sbjct: 120 IYAGKQLADDKTAKDYNIE 138
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 102 bits (245), Expect = 2e-22
Identities = 54/78 (69%), Positives = 58/78 (74%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG K KT
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG----AKKRKKKT 84
Query: 191 ITLEVEASDTIENVKAKI 244
T + T + VK +
Sbjct: 85 YTKPKKIKHTHKKVKLAV 102
Score = 91.1 bits (216), Expect = 6e-19
Identities = 48/74 (64%), Positives = 53/74 (71%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG K KT T
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG----AKKRKKKTYTKP 88
Query: 430 VEASDTIENVKAKI 471
+ T + VK +
Sbjct: 89 KKIKHTHKKVKLAV 102
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 42
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 44 IFAGKQLEDGRTLADYNIQK 63
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 101 bits (243), Expect = 3e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 384
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 42
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 44 IFAGKQLEDGRTLADYNIQK 63
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 101 bits (243), Expect = 3e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 384
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 42
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 44 IFAGKQLEDGRTLADYNIQK 63
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 42
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 44 IFAGKQLEDGRTLADYNIQK 63
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 101 bits (242), Expect = 4e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 33 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 42
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQK 569
IFAGKQLEDGRTL+DYNIQK
Sbjct: 44 IFAGKQLEDGRTLADYNIQK 63
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 145
KIQDK+GIP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 114 KIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQR
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQR 127
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 372
++GIP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 118 KQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQ 119
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 510 IFAGKQLEDGRTLSDYNIQKNPHSILY 590
IF GKQLEDG TL+DYNIQ + SIL+
Sbjct: 129 IFKGKQLEDGLTLADYNIQND--SILH 153
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 68.1 bits (159), Expect = 5e-12
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
Frame = +1
Query: 199 GSRSIRHN*ECEGEDPRQRGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQ 339
GS +IR E + + + GIP +QQRLIF G+ ++ D D I
Sbjct: 68 GSDTIR---ELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKIN 124
Query: 340 KESTLHLVLRLRGG--MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPS 513
E T LVLRL M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ +
Sbjct: 125 GEPTRQLVLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLN 184
Query: 514 LLASSWKTDA 543
L + K +A
Sbjct: 185 HLGTKLKNNA 194
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Frame = +1
Query: 298 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKTLTGKTITLEVEASDTIENV 459
++ED D I E T LV+ L G M IF+KTLTG+T T EV+ SDTI +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGRTNTYEVKGSDTIREL 75
Query: 460 KAKIQDKEGIPPDQQR 507
KAK ++KEGIP +QQR
Sbjct: 76 KAKHEEKEGIPVEQQR 91
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRLRG 151
K ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 78 KHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRLGP 137
Query: 152 G--MQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 253
M+IFV T+ KT LEV+ SDTI+ +K+ I D+
Sbjct: 138 AVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQ 173
Score = 50.8 bits (116), Expect = 7e-07
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = +2
Query: 71 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKTLTGKTITLEVEASDTIENV 232
++ED D I E T LV+ L G M IF+KTLTG+T T EV+ SDTI +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGRTNTYEVKGSDTIREL 75
Query: 233 KAKIQDKE 256
KAK ++KE
Sbjct: 76 KAKHEEKE 83
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 127
I D+ G P DQQ L G +L++ T+SDYNI+ ++ L
Sbjct: 170 IHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 34.7 bits (76), Expect = 0.052
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 354
Q G P DQQ L G +L++ T+SDYNI+ ++ L
Sbjct: 173 QGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVE-ASDTIE 226
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVE-ASDTIE 453
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 64.1 bits (149), Expect = 7e-11
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
+I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG
Sbjct: 29 RIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
+ GIPP QR+++ GKQL D T YN+++ S LHLVL LRGG
Sbjct: 33 KEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQR 42
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M+I VKTLT K I +E+E +DTIE +K +I++KE
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKE 34
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 RGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
RG Q+L+F G++L + DY + + + LHLVL+L + VKT GK
Sbjct: 67 RGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFH 126
Query: 430 VEASDTIENVKAKIQDKEG--IPPDQQ 504
VE I VK +I K G + PD+Q
Sbjct: 127 VERGRNIGYVKKQISKKRGDFVDPDEQ 153
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ G Q+L+F G++L + DY + + + LHLVL+L + VKT GK
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGK 121
Query: 188 TITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILY 364
VE I VK +I K + +L K + +N S+L+
Sbjct: 122 HCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLH 180
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +2
Query: 8 RKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 142
++I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 138 KQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
Score = 35.5 bits (78), Expect = 0.030
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 247 RQRG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 369
++RG + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 142 KKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 RGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
RG Q+L+F G++L + DY + + + LHLVL+L + VKT GK
Sbjct: 67 RGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFH 126
Query: 430 VEASDTIENVKAKIQDKEG--IPPDQQ 504
VE I VK +I K G + PD+Q
Sbjct: 127 VERGRNIGYVKKQISKKRGDFVDPDEQ 153
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ G Q+L+F G++L + DY + + + LHLVL+L + VKT GK
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGK 121
Query: 188 TITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILY 364
VE I VK +I K + +L K + +N S+L+
Sbjct: 122 HCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLH 180
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +2
Query: 8 RKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 142
++I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 138 KQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
Score = 35.5 bits (78), Expect = 0.030
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 247 RQRG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 369
++RG + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 142 KKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 51.2 bits (117), Expect = 6e-07
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ +G +Q+L++ G+++ + + DY + LHLV+RL I V+T+ GK
Sbjct: 60 RIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSDLQAISVRTVDGK 119
Query: 188 TITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYC 367
L VE S + VK +I KE+ L I L + D T +N ++++
Sbjct: 120 EFELVVERSRNVGYVKQQIASKEKELGIPRDHELTLDGEELDDQRLITDLCQNGDNVIHL 179
Query: 368 VFVEACR 388
+ ++ +
Sbjct: 180 LISKSAK 186
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +1
Query: 253 RGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 429
+G +Q+L++ G+++ + + DY + LHLV+RL I V+T+ GK L
Sbjct: 65 KGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSDLQAISVRTVDGKEFELV 124
Query: 430 VEASDTIENVKAKIQDKE---GIPPDQQ 504
VE S + VK +I KE GIP D +
Sbjct: 125 VERSRNVGYVKQQIASKEKELGIPRDHE 152
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 142
KI + G+P QQRLIF G+ L+D LS+Y+++ TLHL++R
Sbjct: 52 KIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 369
+ G+P QQRLIF G+ L+D LS+Y+++ TLHL++R
Sbjct: 56 ETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRPSLLASSWKTDAPCQTTT 561
+++ +KTL +T T +V ++T+ K KI + G+P QQR K D P
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 562 FKRIHT 579
+ HT
Sbjct: 84 LENGHT 89
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 298 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 462
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 463 AKIQDKEGIPP 495
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 71 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 235
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 236 AKIQDK 253
I D+
Sbjct: 76 NMIHDQ 81
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEEFLL 268
M+I +KT GKTI LE+E S ++K + + +L
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIKIHAEPTRQLVL 38
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVE-ASDTIE 453
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ G +Q+L+F+G++L + + DY + S LHLVL+L + + V T GK
Sbjct: 62 RIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLLVTVITTCGK 121
Query: 188 TITLEVEASDTIENVKAKI 244
V+ + +K +I
Sbjct: 122 VFQFHVDRRRNVGYLKKRI 140
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 271 QQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 447
+Q+L+F+G++L + + DY + S LHLVL+L + + V T GK V+
Sbjct: 73 RQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRN 132
Query: 448 IENVKAKIQDKEG 486
+ +K +I KEG
Sbjct: 133 VGYLKKRI-SKEG 144
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 17 QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--LRGGMQIFVKTLTGK 187
++ +G P D Q ++F G++L+D R + S +HL+++ + ++ T TGK
Sbjct: 142 KEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHLLVKKSVEDTVKREEDTATGK 201
Query: 188 TITLE 202
LE
Sbjct: 202 DSLLE 206
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 253 RGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--LRGGMQIFVKTLTGKTIT 423
+G P D Q ++F G++L+D R + S +HL+++ + ++ T TGK
Sbjct: 145 KGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHLLVKKSVEDTVKREEDTATGKDSL 204
Query: 424 LE 429
LE
Sbjct: 205 LE 206
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 136
+ +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 47 VAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 363
+P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 53 VPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 136
I +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 47 IAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 363
+P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 53 VPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/47 (38%), Positives = 35/47 (74%)
Frame = +2
Query: 8 RKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 148
++I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV R++
Sbjct: 123 QRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 375
IP +QR+I+ GKQL+ +L+ Y+I+++++L LV R++
Sbjct: 131 IPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
Score = 36.3 bits (80), Expect = 0.017
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 382 MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQR 137
Score = 31.5 bits (68), Expect = 0.48
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTIT 196
D + + Q+ + + + E+ R+LS S RL QIFV+ ++G KTI
Sbjct: 54 DADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL----QIFVRMMSGGKTIV 109
Query: 197 LEVEASDTIENVKAKIQDK 253
+ E DT+E + +I+ K
Sbjct: 110 IHAEKYDTVEKLHQRIEWK 128
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 8 RKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
++I ++ IP QRLI G Q+ DG +S Q ++T++LVL LRGG F L G
Sbjct: 37 QRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/54 (44%), Positives = 30/54 (55%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 411
Q IP QRLI G Q+ DG +S Q ++T++LVL LRGG F L G
Sbjct: 42 QTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQR 507
+Q FV+ L GK++TL + E +K +I ++ IP QR
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQR 51
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 507
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQ 42
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ 247
M+I V T + ITL+V++ +T+ENVKA ++
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLE 31
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/37 (43%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 29 GIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 136
G+ P++Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 45 GVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/37 (43%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +1
Query: 256 GIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 363
G+ P++Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 45 GVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 35.9 bits (79), Expect = 0.023
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 486
M+IFVKTL+G +EV+ +D + +VK I+ +G
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKG 35
Score = 34.3 bits (75), Expect = 0.069
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ 247
M+IFVKTL+G +EV+ +D + +VK I+
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIE 31
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 35.1 bits (77), Expect = 0.039
Identities = 20/65 (30%), Positives = 39/65 (60%)
Frame = +2
Query: 5 TRKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+RK+ KE + ++ + GK+LED ++L++ N+Q S +HL LR + + + + L G
Sbjct: 530 SRKLDFKE---TEAVKMFYMGKELEDEKSLAEQNVQPNSLVHL-LRTKVHLWPWAQKLPG 585
Query: 185 KTITL 199
+ +L
Sbjct: 586 ENKSL 590
Score = 33.9 bits (74), Expect = 0.091
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +1
Query: 277 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 426
++ + GK+LED ++L++ N+Q S +HL LR + + + + L G+ +L
Sbjct: 542 KMFYMGKELEDEKSLAEQNVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 486
M+IFVKTL G +EV+ D++ +VK I+ +G
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQG 35
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ 247
M+IFVKTL G +EV+ D++ +VK I+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIE 31
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 486
M+IFVKTL G +EV+ D++ +VK I+ +G
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQG 35
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ 247
M+IFVKTL G +EV+ D++ +VK I+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIE 31
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 33.9 bits (74), Expect = 0.091
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 8 RKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 133
RKI+ + IP +Q + F GK LED + +++I + LHL
Sbjct: 28 RKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 360
IP +Q + F GK LED + +++I + LHL
Sbjct: 36 IPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 504
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQ 41
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M+ V+ L G + +EVE +DT+ VK KI+ +
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQ 34
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 504
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQ 41
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ 247
M+ V+ L G + LEV+ DT+ VK KI+
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIE 31
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 8 RKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
++I ++ IP QRLI G Q+ +S Q ++T++LVL LRGG
Sbjct: 37 QRIFEQTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNLVLSLRGG 81
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 250 QRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
Q IP QRLI G Q+ +S Q ++T++LVL LRGG
Sbjct: 42 QTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNLVLSLRGG 81
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQR 507
+Q FV+ L GK++TL + E +K +I ++ IP QR
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQR 51
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 486
M++ VKTL G + V SDTI VK I+D +G
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQG 35
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M++ VKTL G + V SDTI VK I+D +
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQ 34
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 486
M++ VKTL G + V SDTI VK I+D +G
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQG 35
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M++ VKTL G + V SDTI VK I+D +
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQ 34
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 486
M++ VKTL G + V SDTI VK I+D +G
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQG 35
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M++ VKTL G + V SDTI VK I+D +
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQ 34
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 489
MQ+F+ GK +EVE + TI ++K KI D G+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGM 36
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD 250
MQ+F+ GK +EVE + TI ++K KI D
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYD 32
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGK---QLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KI D G+ Q L GK ++ G T+ DY I+ H+ R+RGG
Sbjct: 29 KIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 133
KI+ +GIP +Q L GK LED DY I ES L L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 247 RQRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 360
+ +GIP +Q L GK LED DY I ES L L
Sbjct: 32 KSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 127
KI+ +GIP +Q L GK LED DY I ES L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 247 RQRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 354
+ +GIP +Q L GK LED DY I ES L
Sbjct: 32 KSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 5 TRKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 136
+RK+ KE + ++ + GK+L+D ++L+ N+Q S +HL+
Sbjct: 691 SRKLDFKE---TEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
Score = 30.7 bits (66), Expect = 0.85
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +1
Query: 277 RLIFAGKQLEDGRTLSDYNIQKESTLHLV 363
++ + GK+L+D ++L+ N+Q S +HL+
Sbjct: 703 KMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 376 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 501
G ++FV+T TG + LE++ SD VK K+Q P ++
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEE 80
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 149 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 247
G ++FV+T TG + LE++ SD VK K+Q
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQ 71
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 735 KIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 259 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 381
IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 742 IPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At5g49100.1 68418.m06078 expressed protein
Length = 396
Score = 30.7 bits (66), Expect = 0.85
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 357 SCTASSWRHADLRENSDRKDHHFGSRSFGHNRECEGEDPRQRRNSS*STASIFAGKQLED 536
S ++SSW + E+ +H+ G G NR R T+S ++GK+
Sbjct: 315 SSSSSSWVSSSSAEHHHHHNHNMGHGGGGRNRSWGWSFASPMRA---FTSSSYSGKR--- 368
Query: 537 GRTLSDYNIQKN 572
GRT+SD KN
Sbjct: 369 GRTISDSTTSKN 380
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 0.85
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 80 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
Score = 30.7 bits (66), Expect = 0.85
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 307 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 483
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 504
+++ ++ +G + T++V DT+ +K KI+ +G P +Q
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQ 42
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQ 504
M++ VKTL G + V +DTI VK I+D K+ P QQ
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQ 44
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 256
M++ VKTL G + V +DTI VK I+D +
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQ 34
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 382 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 504
+ + ++ +G + T++V DT+ +K KI+ +G P +Q
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQ 76
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 280 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 459
L+ AG LE + + +++ ++ L +V R G + VKT G + +V T+ +
Sbjct: 455 LVGAGLLLESNKKVYMHDMIRDMALWIVSEFRDGERYVVKTDAGLSQLPDVTDWTTVTKM 514
Query: 460 KAKIQDKEGIPPDQQRP 510
+ + IP D + P
Sbjct: 515 SLFNNEIKNIPDDPEFP 531
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 29 GIPPDQQRLIFAGKQLED 82
G+ P QQRL+F GK+ ED
Sbjct: 103 GLEPKQQRLVFKGKERED 120
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 256 GIPPDQQRLIFAGKQLED 309
G+ P QQRL+F GK+ ED
Sbjct: 103 GLEPKQQRLVFKGKERED 120
>At2g17110.1 68415.m01974 expressed protein
Length = 733
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 167 VKTLTGKTITLEVEASDTIENVKAKIQDKEEFLLINSVSSLLASSWKTDAPC 322
V++L+ K I + ++ D I KI+D+E +L +N + L+ WK+ C
Sbjct: 456 VRSLSTK-IRIAIQVVDKISVTINKIRDEELWLQLNELIQGLSKMWKSMLEC 506
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Frame = +2
Query: 17 QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KESTLHLVLRL 145
+DKE P + +LI AGK LE+ RTL++ + T+H+VLRL
Sbjct: 44 KDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIITMHIVLRL 94
>At5g16280.1 68418.m01901 expressed protein
Length = 1265
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 227 NVKAKIQDKEEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRSS 394
+VK QD +E L + VSS LAS +++ CQ + + +P+++ + + +SS
Sbjct: 1021 DVKLYTQDDDE-KLFDIVSSPLASFHESERSCQGPSVQVSPNTVDFILISRLAKSS 1075
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 28.3 bits (60), Expect = 4.5
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 178
++ + G+ P+ +LIFAGK L+D TLS I KE++ L R +
Sbjct: 29 EVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKILSCRQAAPEE------ 81
Query: 179 TGKTITLEVEASDTIENVKA 238
GK+I E E + + VKA
Sbjct: 82 -GKSIMAEEERARRLSRVKA 100
Score = 27.9 bits (59), Expect = 6.0
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 238 EDPRQRGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 405
E ++ G+ P+ +LIFAGK L+D TLS I KE++ L R +
Sbjct: 29 EVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKILSCRQAAPEE------ 81
Query: 406 TGKTITLEVEASDTIENVKA 465
GK+I E E + + VKA
Sbjct: 82 -GKSIMAEEERARRLSRVKA 100
>At4g29370.1 68417.m04196 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 378
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 630 QSFYEDLHASSKTHTRWSVDSFECCSLTRCVRLPAACQ--QRWTLLIRRN 487
++F LH+ R+ + + E C L C+R A + RW L RR+
Sbjct: 54 KTFRSLLHSQPLYSARYQLGTTEICCLYLCLRFVTATEPVSRWFTLSRRS 103
>At4g25840.1 68417.m03717 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|Q08623 GS1 protein
{Homo sapiens}; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase
Length = 298
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +1
Query: 85 THLVRLQHSKRIHTPSCTASSWRHADLRKNSDRKDHHFGSRSIRHN*ECEGEDPRQRGIP 264
+ L+R H K I T + RH DL+ R+ S+ H+ G+DP +
Sbjct: 161 SRLLRHLHGKGIPICIATGTHTRHFDLKTQRHRE-----LFSLMHH-VVRGDDPEVKEGK 214
Query: 265 PDQQRLIFAGKQLEDG 312
P + A ++ EDG
Sbjct: 215 PAPDGFLAASRRFEDG 230
>At2g15680.1 68415.m01795 calmodulin-related protein, putative
similar to calmodulin-related protein 2, touch-induced
SP:P25070 from [Arabidopsis thaliana]
Length = 187
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 188 SFRSEFLRRSACLHEDAVQDGVWILFECCSLTRCVRLPAACQQR*DA-VDQEEFLLCLGS 12
SF + L + + V +W L E CSL C R+ A D V+ EEF+ + S
Sbjct: 125 SFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMSS 184
Query: 11 SS 6
++
Sbjct: 185 NN 186
>At1g26370.1 68414.m03217 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 717
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +1
Query: 13 DPRQRRNSS*STASHLCWQAAGRRTHLVRLQHSKRIHTPSCTASSWRHADLRKNSDRKDH 192
DPR++R + ++ +H T+L + S A S + D K++
Sbjct: 538 DPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKEN 597
Query: 193 HFGSRSIRH 219
+ SRS++H
Sbjct: 598 YVNSRSLKH 606
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,949,812
Number of Sequences: 28952
Number of extensions: 357123
Number of successful extensions: 1702
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -