Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00462
         (773 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499455 Cluster: hypothetical protein 86.t00023; ...    35   2.0  
UniRef50_Q8MMC8 Cluster: CG9047-PA, isoform A; n=4; Sophophora|R...    34   3.4  

>UniRef50_UPI0000499455 Cluster: hypothetical protein 86.t00023;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 86.t00023 - Entamoeba histolytica HM-1:IMSS
          Length = 487

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 279 VFFAMFIIVESIRVWNNNEKKFSKAQNQPMKLKGLFSTIVPSPVT*TILK 130
           VFF  FI+ +   ++++N  ++SK  NQP K+  +   I  S V  T LK
Sbjct: 208 VFFTKFIVPDEYYIYHSNNLEYSKMSNQPHKIFRILDDINWSEVKSTELK 257


>UniRef50_Q8MMC8 Cluster: CG9047-PA, isoform A; n=4; Sophophora|Rep:
           CG9047-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 661

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
 Frame = +2

Query: 161 TIVEKSPFSFMGWFWA--LLNFFSLLF 235
           TI+E+  F F+G+ WA  L+NFF +LF
Sbjct: 22  TIIERQVFDFLGYMWAPILVNFFHILF 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,739,084
Number of Sequences: 1657284
Number of extensions: 10524260
Number of successful extensions: 26282
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26270
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)