Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00462
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 246 IRVWNNNEKKFSKAQNQPMKLKGLFSTIVPSPVT 145
           IR+W  +  K    ++  + +K    ++VP+PVT
Sbjct: 131 IRLWGVSFSKKQILRSDDLAVKTTSKSLVPTPVT 164


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 571 IFFSLFCCLKFYI 533
           +FF  FCC+ F+I
Sbjct: 10  LFFFSFCCILFFI 22


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -3

Query: 321  WFRRPTSWWS 292
            W  +P++WWS
Sbjct: 1035 WTTKPSTWWS 1044


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 163 SPISCNVNHIEDFCL 119
           S   C++N I+ FCL
Sbjct: 373 SDFDCDINSIQYFCL 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,939
Number of Sequences: 336
Number of extensions: 3203
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)