Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00456
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.5  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    23   2.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 134 IEYTYVKFKL*NSLFNTIVLLM 69
           I+YT  + K   S+FNT++ LM
Sbjct: 252 IQYTETETKTWGSVFNTVLELM 273


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 7/29 (24%)
 Frame = +1

Query: 436 SWTSTTPEAEPNRC-------LLYYKYIQ 501
           +W    PE E NRC       +L YK IQ
Sbjct: 26  NWGKRAPEGESNRCKESVDTIMLIYKIIQ 54


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 645  RDKICFTV*LVNSIFFII 592
            RDK+ FT  ++NS++ I+
Sbjct: 1222 RDKMVFTFLMLNSLYVIV 1239



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 680 MLQHI*HKKIRRVTKFVLRCS*LIVFFLLLLRWV--DELTAH 561
           M+ H+  KK  R  K   +C  + ++FLL  R    DEL+AH
Sbjct: 654 MIAHLKDKKKIRAKKRWSQC--MYMYFLLGFRLQANDELSAH 693


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 645  RDKICFTV*LVNSIFFII 592
            RDK+ FT  ++NS++ I+
Sbjct: 1222 RDKMVFTFLMLNSLYVIV 1239



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 680 MLQHI*HKKIRRVTKFVLRCS*LIVFFLLLLRWV--DELTAH 561
           M+ H+  KK  R  K   +C  + ++FLL  R    DEL+AH
Sbjct: 654 MIAHLKDKKKIRAKKRWSQC--MYMYFLLGFRLQANDELSAH 693


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,020
Number of Sequences: 336
Number of extensions: 4381
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)