Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00456
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   4.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.7  
AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      23   9.7  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +1

Query: 370 LFSMHLNTFCICLQLVVSG-YFRS 438
           LF+M L+TF IC+ ++V   +FRS
Sbjct: 307 LFTMILDTFSICVTVIVLNIHFRS 330


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 385 LNTFCICLQLVVSGYFRSWTS-TTPEAEPNRCLLYYKYIQGGCGIYVA 525
           L T C+C+ L+V   +  W S   P  EP   L Y  + + G  I+ A
Sbjct: 15  LATLCLCVYLLVVRKYSFWRSYHVPYVEPE--LPYGNFKEMGKSIHPA 60


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 226 NTVTALRNEKVHRYFSRRSLNLETFTFDR 140
           NT+T  RN+++ +Y   +   +  F  +R
Sbjct: 301 NTLTRTRNQQIQKYLCEQKRKIGEFEVER 329


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 277 VGNAILVIKINHNA*YNNTVTALRNEKVHRYFSRRSLNLET 155
           V N    I   H+  Y NT+  LRNE V +      L + T
Sbjct: 582 VDNPSNTINERHDQRYANTLQELRNEMVMQKEGENELTVLT 622


>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 206 PKSGNCIIILCIMVYFDNKYSVSYST 283
           PK  N I +L    YFD  Y+V YST
Sbjct: 77  PKKMNSIRLL----YFDMSYNVIYST 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,539
Number of Sequences: 2352
Number of extensions: 16009
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)