Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00454
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   6.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.0  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   7.9  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -3

Query: 370 HTSGTFVG*TQTAAV*RLSEGFIISIGIGYAAFRQSLLTLMMCHHQ 233
           HT G F+    T  +  L  G++ +  +G+  FR+ L   +  + Q
Sbjct: 110 HTFGRFLAPNLTYLLVALYSGYVWTDILGFGYFREYLAEAVQLYFQ 155


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/69 (21%), Positives = 34/69 (49%)
 Frame = -2

Query: 221 KSIRVIAFISHALSSLGDTTLLYNIDFT*ESTLLLFINVLSKGISSIVSKIARTISWISK 42
           KS+  +  I++    LGDT  ++N  F  +  L++F +   + +S++      TI+   +
Sbjct: 215 KSVEELMNIANYYRILGDTVEIFNSLFGYQIILVIF-DCCLETVSALNGAFLYTINGQGQ 273

Query: 41  LLLKFYFLN 15
             ++ +  N
Sbjct: 274 FNIEMFLCN 282


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 427 VATAATCMFFSNFIAFRAVHTSGTFVG 347
           ++  A C F++  +     HT+G  +G
Sbjct: 239 ISWQAVCTFYNILLCDSVAHTAGELLG 265


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 508 YVVIDRSLVLTGEWETLFNEIQQMKKACGSAHLKVILG 621
           Y+  +  L+L   + TL  ++ ++ K C +    V+LG
Sbjct: 539 YLASELVLMLKNRFVTLNVQLTKLTKNCATKAQSVVLG 576


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 427 VATAATCMFFSNFIAFRAVHTSGTFVG 347
           ++  A C F++  +     HT+G  +G
Sbjct: 239 ISWQAVCTFYNILLCDSVAHTAGELLG 265


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 427 VATAATCMFFSNFIAFRAVHTSGTFVG 347
           ++  A C F++  +     HT+G  +G
Sbjct: 559 ISWQAVCTFYNILLCDSVAHTAGELLG 585


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 260 SNFDDVSSPESVVKSIRVIAFISHALSSLG 171
           S  DD+  PE ++    V+  +++ L  LG
Sbjct: 88  SGNDDIYGPEFLLSENLVLVTVNYRLGMLG 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,010
Number of Sequences: 336
Number of extensions: 3746
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)