Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00454
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-13|AAA79343.1|  303|Caenorhabditis elegans Hypothetical p...    98   5e-21
U64843-12|AAL08039.1|  492|Caenorhabditis elegans Hypothetical p...    28   6.1  
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    28   6.1  
AL110485-25|CAB60373.1|  672|Caenorhabditis elegans Hypothetical...    28   8.1  

>U37429-13|AAA79343.1|  303|Caenorhabditis elegans Hypothetical
           protein F09E5.3 protein.
          Length = 303

 Score = 98.3 bits (234), Expect = 5e-21
 Identities = 45/77 (58%), Positives = 59/77 (76%)
 Frame = +1

Query: 511 VVIDRSLVLTGEWETLFNEIQQMKKACGSAHLKVILGVGELGTYYNVYKASMIAMMAGAD 690
           +VI R+  L  +W+T+ +E+   KKACGSAHLK IL  GEL T  NVY+AS  +++AG+D
Sbjct: 158 IVISRASALDEDWKTVHDEVLACKKACGSAHLKTILATGELKTLSNVYRASWASILAGSD 217

Query: 691 FIKTSTGKEAVNATLPI 741
           FIKTSTGKE+VNATL +
Sbjct: 218 FIKTSTGKESVNATLEV 234



 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 33/79 (41%), Positives = 48/79 (60%)
 Frame = +3

Query: 252 KVRRLCRKAAYPIPIDIMNPSDNLHTAAVCVYPTKVPDVCTALKAMKLEKNIQVAAVATG 431
           KV  L ++A  P+P D   PS  +H  +VCVYP ++ DV   L + KL  NI   +VA G
Sbjct: 78  KVVALAKRAINPVPTD---PS--IHCGSVCVYPQRIADVKKFLASSKLNSNI--TSVAGG 130

Query: 432 FPSGLYPLPTRLEEIRMTV 488
           FPSG Y L +++ E+ ++V
Sbjct: 131 FPSGQYHLKSKVLEVELSV 149



 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 175 KDERAWLMKAITLIDLTTLSGDDTSSKL 258
           KDE   + K I  IDLTTL+GDDT+SK+
Sbjct: 55  KDE---IRKVIQYIDLTTLNGDDTASKV 79


>U64843-12|AAL08039.1|  492|Caenorhabditis elegans Hypothetical
           protein K06C4.9 protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 131 STLLLFINVLSKGISSIVSKIARTISWISKLLLKFYFLNCV 9
           +T L FIN++SK  +     + R I  IS LLL  Y  + V
Sbjct: 391 NTTLKFINMVSKTYAQFRFPVIRVIHHISNLLLVIYSASTV 431


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
            protein F59H6.5 protein.
          Length = 1486

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 49   IHEMVRAIFETIDDMPLDNTFINKSNVD-SQVKSILYNNVVSPKDERAWLMKAITLID 219
            + E+  A+ +     P DN  +   NVD +Q+   ++N +V   +ER +L +   +++
Sbjct: 1267 VEEVFGAVIDPTTSYPCDNVILTPKNVDVAQLNDDVHNRMVG--EERIYLSRDEVIVE 1322


>AL110485-25|CAB60373.1|  672|Caenorhabditis elegans Hypothetical
           protein Y46G5A.31 protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +3

Query: 264 LCRKAAYPIPIDIMNPSDN--LHTAAVCVYPTKVPDVCT 374
           +C +   P P ++M+P+DN  L    + ++ + +P +CT
Sbjct: 429 ICLQGHLPEPEELMSPADNILLKRCIMSLHNSSLPPICT 467


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,284,464
Number of Sequences: 27780
Number of extensions: 367766
Number of successful extensions: 1006
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)