Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00453
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 73 3e-13
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 66 4e-11
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 60 1e-09
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 50 3e-06
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 47 1e-05
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 46 4e-05
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 41 0.001
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 39 0.004
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 38 0.012
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 37 0.020
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 36 0.047
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 34 0.11
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18) 30 2.3
SB_33052| Best HMM Match : Ribosomal_S3_C (HMM E-Value=4.2) 29 3.1
SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05) 29 4.1
SB_35716| Best HMM Match : PC4 (HMM E-Value=1.1e-12) 29 4.1
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 29 5.4
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 28 7.2
SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7) 28 9.5
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N W+ AI G GT + GG +K M F DYP SPP +F ++HPN+Y SG VC+S+
Sbjct: 1153 NTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISI 1212
Query: 436 LDEEKD-----------WRPAITIKQILLGIQDLL 507
L D W P ++ ILL + LL
Sbjct: 1213 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLL 1247
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
+L WE + G GT +E G +K M+F +YP PP F ++HPNV+ +G VC+S+
Sbjct: 361 DLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISI 420
Query: 436 LDE-----------EKDWRPAITIKQILLGIQDLL 507
L E ++ WRP T++ I+L + +L
Sbjct: 421 LHEPGEDKYGYEKADERWRPIHTVETIMLSVISML 455
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +1
Query: 286 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWR 459
G +GTP+ G++KL + + YP PPK +F P++HPN+ SG +CL L + W+
Sbjct: 4 GAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWK 63
Query: 460 PAITIKQILLGIQDLL 507
PA+ I +L I L+
Sbjct: 64 PALNISSVLSTILILM 79
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/84 (29%), Positives = 48/84 (57%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N++ W+ I + P+ G +++ + F +YP PPK F+ ++HPN+ G VCL +
Sbjct: 22 NILYWQGLIVPEM-PPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPI 80
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
+ E +W+PA +Q++ + L+
Sbjct: 81 ISPE-NWKPATKTEQVIQALLALV 103
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/84 (36%), Positives = 42/84 (50%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
+L W I G G+ +EGG++ L + F DYP PPK G VCL +
Sbjct: 123 DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK---------------GMVCLDI 167
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L + W PA+TI ++LL I LL
Sbjct: 168 LKD--SWSPALTISKVLLSICSLL 189
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 352 PSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWRPAITIKQILLGIQDLL 507
P PPK +F P++HPN+ SG +CL L + W+PA+ I +L I L+
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILM 93
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +1
Query: 376 FEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLM 510
F +FHPNV +G +C++ L +KDW+P + IKQ+LL ++ LL+
Sbjct: 147 FLTKIFHPNVAKNGEICVNTL--KKDWKPDLGIKQVLLTVKCLLI 189
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 432
N+ +E I G + GG +K + +DYP++PP + ++HPN+ G+VCLS
Sbjct: 35 NMEEFELQITPTDGA-YRGGQFKFS-VKTEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLS 92
Query: 433 LLDEEKDWRPAITIKQILLGI 495
LLD DW + ++ ++ G+
Sbjct: 93 LLD---DWNESNDLEDLVQGL 110
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLDE 444
I G TP+EGG + + DYP PP+ K F+PN+Y +G VCLS++ +
Sbjct: 17 ITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSIIGD 76
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
NL W + G T + GG Y R+I +YP PP P + +CLS+
Sbjct: 37 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTP--NGRFEIGKKICLSM 94
Query: 436 -LDEEKDWRPAITIKQILLGI 495
+ W+P+ +I+ +L+ I
Sbjct: 95 SAHHPETWQPSWSIRTVLMAI 115
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ +E I G + GG +K + DYP+ P + ++HPN+ VC+SL
Sbjct: 35 NMEEFELQITPTDGA-YRGGQFKFS-VRTTDYPNVAPSINCKTKIYHPNMDGYDGVCMSL 92
Query: 436 LDEEKDWRPAITIKQILLGI 495
LD DW+ + ++ ++ G+
Sbjct: 93 LD---DWQASNDLEDLVQGL 109
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL---FHPNVYPSGTVCLS 432
I G GTP++ GL+ ++ +YP +PP + +PN+Y G VC++
Sbjct: 640 IEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 369
+L W I G G+ +EGG++ L + F DYP PPK
Sbjct: 163 DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 259 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 369
L W I G G+ +EGG++ L + F DYP PPK
Sbjct: 51 LYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPK 87
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 369
I G TP+EGG Y L ++ + YP +PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPP 366
NL W + G T + GG Y R+I +YP PP
Sbjct: 2 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPP 38
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -2
Query: 251 NHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFSTKITRFMSRAS 111
+ L S S++N+ D P L++ LN HL ++ ++T+FM + +
Sbjct: 2870 SRLRSPSGSKRNKEDSPNVPLTLSDLNNHLNTINLQVEVTKFMHKCA 2916
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 325 LRMIFKDDYPSSPPKCKFEPPLFHPN-VYPSGTVCLSLLDEEKDWRPAITIKQILLGIQD 501
L + F +++P +PP + P V G +C+ LL K W A T++ ++L
Sbjct: 793 LNITFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELL-TPKGWSSAYTVEAVVLQFSA 851
Query: 502 LLMSLT*KIQRKLK 543
++ +I R K
Sbjct: 852 AVVKGKGRIDRTCK 865
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 286 GKKGTPWEGGLYKLRMIFKDDYPSSPP 366
G GTP+EGG++K+R+ + YP P
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSP 82
>SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18)
Length = 484
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 364 PKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 507
P C P +PNV + TVC+ L E DW ++ + L I +L
Sbjct: 165 PNCTMCPIKQYPNV--NRTVCIDLPLENLDWTSLVSASMLALAITAML 210
>SB_33052| Best HMM Match : Ribosomal_S3_C (HMM E-Value=4.2)
Length = 260
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 672 RQWLSSLTLHCPILIFTQQQPL 607
R+WL S+TL+CP+L T + L
Sbjct: 178 REWLHSITLNCPLLNLTASKNL 199
>SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05)
Length = 798
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1
Query: 226 EAYEESRWFMNLMTWECAIPGKKGTPWEGGL 318
+ Y + +W+ ++++W+ A + T WEG L
Sbjct: 659 KGYPDKKWWSHILSWKKAYRSGQTTGWEGWL 689
>SB_35716| Best HMM Match : PC4 (HMM E-Value=1.1e-12)
Length = 501
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 152 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGS*I**LGNVRYLVKRGLHGKV 313
S ++ L E +K +K+ P + K DGS + L N R + R GKV
Sbjct: 426 SYVSDVMLPESKKKQKKEKPEASSSSGTKQDDGSYVFPLANKRQVTVRDFRGKV 479
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 290 KRGLHGKVGCI-NYV*SSKMIIHQVLQNA 373
K+ LHGKVGCI + + S+ ++IH + A
Sbjct: 350 KQNLHGKVGCILSIIGSTVLVIHAPQEEA 378
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 307 PMESPFYQVSHIPKSLNS*TIWILHRPRDKTKGMVLTP 194
P+ES FYQ SH K ++ + H+ R + G + P
Sbjct: 235 PLESTFYQCSHCSKIYDNSSSLARHKARHEMTGKSVNP 272
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 346 DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAI 468
D + P C F +F +P V LS+ D+E+ WR ++
Sbjct: 60 DATTDAPACFFYKEIFR--AFPYAKVILSVRDDEESWRRSL 98
>SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7)
Length = 350
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 346 DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 459
D + P C F +F +P V LS+ D+E+ WR
Sbjct: 60 DATTDLPACIFYKEIF--KAFPDAKVILSVRDDEESWR 95
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 298 TPWEGGLYKLRMIFKDDYPSSPPKCKF 378
T +E +Y L+++ +YP PP KF
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 298 TPWEGGLYKLRMIFKDDYPSSPPKCKF 378
T +E +Y L+++ +YP PP KF
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,187,967
Number of Sequences: 59808
Number of extensions: 505440
Number of successful extensions: 1110
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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