Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00453
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 168 3e-42
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 168 3e-42
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 86 3e-17
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 86 3e-17
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 78 8e-15
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 78 8e-15
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 76 2e-14
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 75 6e-14
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 71 1e-12
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 67 1e-11
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 67 1e-11
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 66 2e-11
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 66 3e-11
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 63 2e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 62 5e-10
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 57 2e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 2e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 55 6e-08
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 52 6e-07
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 4e-06
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.003
AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical ... 31 1.2
AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine re... 30 2.1
AL023828-28|CAI46623.1| 117|Caenorhabditis elegans Hypothetical... 28 6.3
AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical ... 28 6.3
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 168 bits (409), Expect = 3e-42
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +1
Query: 253 MNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 432
+NL WECAIPG+K T WEGGLY++RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLS
Sbjct: 36 LNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLS 95
Query: 433 LLDEEKDWRPAITIKQILLGIQDLL 507
LLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 96 LLDENKDWKPSISIKQLLIGIQDLL 120
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +2
Query: 149 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGS 253
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGT 35
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 474 KANFVGYSRSSHEPNVKDPAQAEAYTIYCQNRLEYDK 584
K +G + PN++DPAQAEAY IYCQNR EY+K
Sbjct: 110 KQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 168 bits (409), Expect = 3e-42
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +1
Query: 253 MNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 432
+NL WECAIPG+K T WEGGLY++RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLS
Sbjct: 36 LNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLS 95
Query: 433 LLDEEKDWRPAITIKQILLGIQDLL 507
LLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 96 LLDENKDWKPSISIKQLLIGIQDLL 120
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +2
Query: 149 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGS 253
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGT 35
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 474 KANFVGYSRSSHEPNVKDPAQAEAYTIYCQNRLEYDK 584
K +G + PN++DPAQAEAY IYCQNR EY+K
Sbjct: 110 KQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N++TWE I G + TP+E G +KL + F ++YP+ PP KF +FHPNVY G++CL +
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L + W P + IL IQ LL
Sbjct: 92 L--QNRWSPTYDVAAILTSIQSLL 113
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 510 EPNVKDPAQAEAYTIYCQNRLEYDK 584
EPN PA + A +Y +NR EY+K
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEK 139
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N++TWE I G + TP+E G +KL + F ++YP+ PP KF +FHPNVY G++CL +
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L + W P + IL IQ LL
Sbjct: 92 L--QNRWSPTYDVAAILTSIQSLL 113
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 510 EPNVKDPAQAEAYTIYCQNRLEYDK 584
EPN PA + A +Y +NR EY+K
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEK 139
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 77.8 bits (183), Expect = 8e-15
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
+L W+ I G +P++GG++ L + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L W PA+TI ++LL I LL
Sbjct: 89 L--RSQWSPALTISKVLLSICSLL 110
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 77.8 bits (183), Expect = 8e-15
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
+L W+ I G +P++GG++ L + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L W PA+TI ++LL I LL
Sbjct: 89 L--RSQWSPALTISKVLLSICSLL 110
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +1
Query: 265 TWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDE 444
+W C +PG +G+PWEGG Y++ + F +P PP C+F+ PL HPNV G++ L +L++
Sbjct: 70 SWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ 128
Query: 445 EKDWRPAITIKQILLGIQDLL 507
E W ++K++L I +LL
Sbjct: 129 E-HWSSETSLKKLLREISNLL 148
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N WEC I G + T + G++ R+ F DYP SPPK +F +FHPN+Y G VC+S+
Sbjct: 33 NFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISI 92
Query: 436 LDEEKD-----------WRPAITIKQILLGIQDLL 507
L D W P +I++ILL + +L
Sbjct: 93 LHAPGDDPTGYELSNERWSPVQSIEKILLSVVSML 127
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N + I G +P+ GG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 32 NARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDI 91
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L ++ W PA+ I+ +LL IQ LL
Sbjct: 92 LKDK--WSPALQIRTVLLSIQALL 113
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
NL W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 436 LDEEKD-----------WRPAITIKQILLGIQDLL 507
L D W P +++ ILL + LL
Sbjct: 98 LHSPIDDPQSGELACERWNPTQSVRTILLSVISLL 132
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 436 LDE-----------EKDWRPAITIKQILLGIQDLL 507
L + E+ W P T++ ILL + +L
Sbjct: 92 LHDPGDDKWGYERPEERWLPVHTVETILLSVISML 126
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 432
NL + I G TP+ GG++ L + D YP SPP KF ++HPNV +G +CL
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 433 LLDEEKDWRPAITIKQILLGIQDLL 507
+L ++ W ++T++ +LL IQ L+
Sbjct: 95 ILKDQ--WAASLTLRTVLLSIQALM 117
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NLMTWECA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 432
NL+ W IP K+ P+ G +K+ + F DYP PPK FE ++HPNV G CL
Sbjct: 31 NLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Query: 433 LLDEEKDWRPAITIKQILLGIQDLL 507
++ E +W+PA +Q+++ + L+
Sbjct: 89 IVTAE-NWKPATKTEQVMMALLSLI 112
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF--EPPLFHPNVYPSGTVCL 429
+L W+ + G +GT + G ++ L+ F YP + P+ F E HP++Y +G +CL
Sbjct: 34 DLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICL 93
Query: 430 SLLDEEKDWRPAITIKQILLGIQDLLMS 513
S+L + DW PA++++ + L I +L S
Sbjct: 94 SILSD--DWTPALSVQSVCLSILSMLSS 119
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 441
I G TP+ GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 442 ----EEKDWRPAITIKQILLGIQDLL 507
E+ W P ++ Q+L+ IQ+++
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVI 534
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPL 390
NLM + I G +GTP+ GG +++++ + YP PPK KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 391 FHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLMS 513
+HPN+ +GT+CL +L ++ W ++T++ +LL +Q +L S
Sbjct: 109 WHPNISSQTGTICLDILKDK--WTASLTLRTVLLSLQAMLCS 148
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N++ W I G TP+EGG+Y +++F D+P PP P + + +CLS+
Sbjct: 36 NILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI 93
Query: 436 LDEEKD-WRPAITIKQILLGIQDLL 507
D D W PA T+ I+ G+ +
Sbjct: 94 SDYHPDTWNPAWTVSTIITGLMSFM 118
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 456
I G + TP+EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 457 RPAITIKQILLGIQDLLMSLT*K 525
++TI ++L+ IQ + + K
Sbjct: 444 PVSMTIYKVLIVIQSWMSNFNEK 466
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N++ W + G TP+ GG Y ++IFK+++P SPP P + + +CLS+
Sbjct: 47 NILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLSI 104
Query: 436 LD-EEKDWRPAITIKQILLGIQDLL 507
D + W P T+ IL+G+ +
Sbjct: 105 SDYHPESWNPGWTVSAILIGLHSFM 129
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 51.6 bits (118), Expect = 6e-07
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 226 EAYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV 405
E Y NL W I G GT +EGG+Y R+IF DYP PP P +
Sbjct: 27 EMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRF 84
Query: 406 YPSGTVCLSLLD-EEKDWRPAITIKQILLGIQDLLMS 513
+ VCLS+ + W P+ +I+ LL + L S
Sbjct: 85 ELNKKVCLSISGYHPETWLPSWSIRTALLALIGFLPS 121
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 286 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDE 444
G K T +E G++++R+ D YP P F +FHPN+ SGTVCL ++++
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQ 94
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +1
Query: 304 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRPAIT 471
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 472 IKQILLGIQDLLMSL 516
+ ++ G+ L L
Sbjct: 132 LTDVVHGLVSLFNDL 146
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 295 GTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 471
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 472 IKQILLGIQDLL 507
++ +LL + LL
Sbjct: 113 MEDVLLNLIVLL 124
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 MNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS-GTVCL 429
M L W +I G TP+E +Y L++ +YP PP +F + V S G +
Sbjct: 36 MTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDK 95
Query: 430 SLLDEEKDWRPAITIKQILLGIQDLLM 510
L ++W + IK +L I+ +M
Sbjct: 96 RNLTTLRNWSNSYMIKTVLEDIRKNMM 122
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 414
I G TP+E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical
protein C23H5.11 protein.
Length = 394
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -1
Query: 321 IQPTFPWSPLFTRYRTFPSH*IHEPSGFFIGLATKPK--GWSLRQAFRSSAKRALAIPDI 148
I + P+ + RTF SH H S FF G+A +PK S + S R +A +
Sbjct: 277 ISYSLPFPLMLVLSRTFRSHLFHLISNFFQGVARRPKIRKDSALRKMTSQIARHMAFSKL 336
Query: 147 FYKNNSIYEPSFN 109
+N+ + E ++
Sbjct: 337 EMENSELDERMYS 349
>AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine
receptor, class h protein33 protein.
Length = 334
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 714 VLF*SPVFTFILLFRQWLSSLTLHCPILIF 625
+LF S +F + ++RQ+LS L + C ++I+
Sbjct: 113 ILFTSRIFMIMNMYRQYLSHLRIFCELMIY 142
>AL023828-28|CAI46623.1| 117|Caenorhabditis elegans Hypothetical
protein Y17G7B.24 protein.
Length = 117
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -2
Query: 326 SLYSPPSHGVPFLPGIAHSQ-VIKFMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLT 150
S SPP H P P I + ++ H S AS Q P K+S+ +NVH +SLT
Sbjct: 3 STRSPPEHSPPCSPLIRRQRPATLYVKH--SPRASHVAQF--PIKKISIPTVNVHKMSLT 58
Query: 149 FSTKIT 132
+ +T
Sbjct: 59 NAECLT 64
>AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical
protein F46F5.14 protein.
Length = 353
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 220 CREAYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFK 342
CR AY +S+ F +L T+E I G + G K+R++ K
Sbjct: 207 CRSAYNKSKNFNDLFTYEACIKAMMGVGTDFG--KVRILKK 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,361,342
Number of Sequences: 27780
Number of extensions: 387627
Number of successful extensions: 959
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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