Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00453
(759 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 144 7e-35
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 89 3e-18
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 3e-18
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 3e-18
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 87 9e-18
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 86 3e-17
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 81 8e-16
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 80 1e-15
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 80 1e-15
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 79 2e-15
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 79 2e-15
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 79 2e-15
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 79 2e-15
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 79 2e-15
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 79 4e-15
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 78 6e-15
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 78 7e-15
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 78 7e-15
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 78 7e-15
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 77 1e-14
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 76 3e-14
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 74 9e-14
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 74 9e-14
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 74 1e-13
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 71 6e-13
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 71 8e-13
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 71 8e-13
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 67 1e-11
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 67 1e-11
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 67 1e-11
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 64 1e-10
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 63 2e-10
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 62 3e-10
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 61 7e-10
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 61 9e-10
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 60 2e-09
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 59 4e-09
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 56 3e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 52 5e-07
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 52 5e-07
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 51 7e-07
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 50 1e-06
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 49 4e-06
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 48 5e-06
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 48 9e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 48 9e-06
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 48 9e-06
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 45 6e-05
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 42 4e-04
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 38 0.010
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 37 0.013
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 33 0.21
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 33 0.27
At3g09300.1 68416.m01104 oxysterol-binding family protein simila... 28 7.7
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 144 bits (348), Expect = 7e-35
Identities = 60/85 (70%), Positives = 68/85 (80%)
Frame = +1
Query: 253 MNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 432
+NLM W C IPGK GT WEGG + L M F +DYPS PPKCKF FHPNVYPSGTVCLS
Sbjct: 37 VNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLS 96
Query: 433 LLDEEKDWRPAITIKQILLGIQDLL 507
+L+E+ WRPAIT+KQIL+GIQDLL
Sbjct: 97 ILNEDYGWRPAITVKQILVGIQDLL 121
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 152 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGS 253
SGIA RLAEERK+WRK+HP GFVA+P DG+
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGT 36
Score = 34.7 bits (76), Expect = 0.067
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 474 KANFVGYSRSSHEPNVKDPAQAEAYTIYCQNRLEYDK 584
K VG PN DPAQ + Y ++CQ+ +EY K
Sbjct: 111 KQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKK 147
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 89.0 bits (211), Expect = 3e-18
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDI 91
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L + W P + IL IQ LL
Sbjct: 92 L--QNQWSPIYDVAAILTSIQSLL 113
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.0 bits (211), Expect = 3e-18
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDI 91
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L + W P + IL IQ LL
Sbjct: 92 L--QNQWSPIYDVAAILTSIQSLL 113
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.0 bits (211), Expect = 3e-18
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDI 91
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L + W P + IL IQ LL
Sbjct: 92 L--QNQWSPIYDVAAILTSIQSLL 113
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 87.4 bits (207), Expect = 9e-18
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+M W I G + TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDI 91
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L + W P + +L IQ LL
Sbjct: 92 L--QNQWSPIYDVAAVLTSIQSLL 113
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 510 EPNVKDPAQAEAYTIYCQNRLEYDK 584
+PN PA AEA ++ +N+ EY++
Sbjct: 115 DPNPDSPANAEAARLFSENKREYNR 139
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 85.8 bits (203), Expect = 3e-17
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ W I G GTP+EGG++ L + F DYP PPK F+ P++HPN+ G++C+++
Sbjct: 35 NIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNI 94
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L ++ W PA+ ++++LL I LL
Sbjct: 95 LKDK--WTPALMVEKVLLSILLLL 116
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 81.0 bits (191), Expect = 8e-16
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDI 122
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L ++ W A ++ ILL IQ LL
Sbjct: 123 LQDK--WSSAYDVRTILLSIQSLL 144
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPNV +G++CL +
Sbjct: 29 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 89 LKEQ--WSPALTISKVLLSICSLL 110
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 59 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 118
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 119 LKEQ--WSPALTISKVLLSICSLL 140
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 89 LKEQ--WSPALTISKVLLSICSLL 110
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 89 LKEQ--WSPALTISKVLLSICSLL 110
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 89 LKEQ--WSPALTISKVLLSICSLL 110
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 30 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 89
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 90 LKEQ--WSPALTISKVLLSICSLL 111
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 89 LKEQ--WSPALTISKVLLSICSLL 110
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 89 LKEQ--WSPALTISKVLLSICSLL 110
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 78.6 bits (185), Expect = 4e-15
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F+ ++HPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+TI ++LL I LL
Sbjct: 89 LKEQ--WSPALTISKVLLSICSLL 110
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 78.2 bits (184), Expect = 6e-15
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G +CL +
Sbjct: 29 DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L ++ W PA+TI ++LL I LL
Sbjct: 89 LKDQ--WSPALTISKVLLSICSLL 110
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 77.8 bits (183), Expect = 7e-15
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+T+ ++LL I LL
Sbjct: 89 LKEQ--WSPALTVSKVLLSICSLL 110
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 77.8 bits (183), Expect = 7e-15
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA+T+ ++LL I LL
Sbjct: 89 LKEQ--WSPALTVSKVLLSICSLL 110
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 77.8 bits (183), Expect = 7e-15
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDI 123
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L ++ W A ++ ILL IQ LL
Sbjct: 124 LQDK--WSSAYDVRTILLSIQSLL 145
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 432
NL IPG GTP+EGG +++ + D YP PPK +F ++HPN+ SG +CL
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 433 LLDEEKDWRPAITIKQILLGIQDLL 507
+L ++ W PA+T+K L+ IQ LL
Sbjct: 91 ILKDQ--WSPALTLKTALVSIQALL 113
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F+ ++HPN+ G++CL +
Sbjct: 30 DIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDI 89
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L E+ W PA T ++LL I LL
Sbjct: 90 LKEQ--WSPAPTTSKVLLSICSLL 111
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 74.1 bits (174), Expect = 9e-14
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 436 LDEEKDWRPAITIKQILLGIQ 498
L E+ W PA+TI ++ L Q
Sbjct: 89 LKEQ--WSPALTISKVTLIFQ 107
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 CA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 450
CA I G GTP+E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 451 DWRPAITIKQILLGIQDLLM 510
DW P++ ++ +L ++ LL+
Sbjct: 101 DWNPSLGLRHVLSVVRCLLI 120
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
NL W I G GTP+EGG++ L +IF DYP PPK F+ ++H NV +G + +++
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNI 123
Query: 436 LDEEKDWRPAITIKQILLGIQDLLM 510
L + W PA+TI ++L I+ + +
Sbjct: 124 LRD--SWSPALTITKVLQAIRSIFL 146
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L ++ W PA+ I+ +LL IQ LL
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALL 114
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L ++ W PA+ I+ +LL IQ LL
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALL 114
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 71.3 bits (167), Expect = 6e-13
Identities = 30/76 (39%), Positives = 49/76 (64%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 459
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 460 PAITIKQILLGIQDLL 507
PA+ I+ +LL IQ LL
Sbjct: 66 PALQIRTVLLSIQALL 81
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 70.9 bits (166), Expect = 8e-13
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Frame = +1
Query: 163 KCTFS*RTESLA*GPSLWFCREAYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFK 342
K FS R S A S W +S N+ W I G T +EGG + M F
Sbjct: 37 KLAFSFRNNSKA---SPWNLSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFP 93
Query: 343 DDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITIKQILL 489
+YP+SPP +F ++HPNVY G VC+S+L D W P T++ I+L
Sbjct: 94 QNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIML 153
Query: 490 GIQDLL 507
I +L
Sbjct: 154 SIISML 159
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 70.9 bits (166), Expect = 8e-13
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92
Query: 436 LDEEKD-----------WRPAITIKQILLGIQDLL 507
L D W P T++ I+L I +L
Sbjct: 93 LHPPGDDPSGYELASERWTPVHTVESIMLSIISML 127
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 432
N+ W I G TP+EGG+++L + YP PP+ +F +FHPNV + +G +CL
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLD 92
Query: 433 LLDEEKDWRPAITIKQILLGIQDLL 507
+L + W PA T++ + I L+
Sbjct: 93 IL--KNAWSPAWTLQSVCRAIIALM 115
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
Query: 436 LDEEKD-----------WRPAITIKQILLGIQDLL 507
L D W P T++ I+L I +L
Sbjct: 94 LHPPGDDPHGYELASERWTPVHTVESIVLSIISML 128
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 436 LDEEKDWRPAITIKQILL 489
L ++ W PA+ I+ +LL
Sbjct: 93 LKDK--WSPALQIRTVLL 108
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ WE + G G P+E G++ + + YP PPK F+ +FHPN+ G + + +
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 436 LDEEKDWRPAITIKQILLGIQDLL 507
L W A+TI +LL I +L
Sbjct: 118 LGSR--WSSALTINLVLLSICSIL 139
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLS 432
NL W + G GT + Y L++ F YP P+ F PP HP++Y +G +CL
Sbjct: 42 NLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLD 101
Query: 433 LLDEEKDWRPAITIKQILLGIQDLLMS 513
+L + W PA+T+ + + I +L S
Sbjct: 102 ILYD--SWSPAMTVSSVCISILSMLSS 126
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLS 432
NL W + G GT + Y+L++ F + YP P+ F P HP++Y +G +CL
Sbjct: 42 NLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLD 101
Query: 433 LLDEEKDWRPAITIKQILLGIQDLLMSLT*K 525
+L + W PA+T+ I + I +L S T K
Sbjct: 102 ILYD--SWSPAMTVSSICISILSMLSSSTEK 130
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 FMNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 429
F T + I G + T + G++ L++ + YP PP F P++HPN+ SG +CL
Sbjct: 41 FSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICL 100
Query: 430 SLLD--EEKDWRPAITIKQILLGIQDLL 507
+L+ + W+P++ I +L ++ LL
Sbjct: 101 DILNLPPKGAWQPSLNISTVLTSMRLLL 128
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLS 432
NL W + G GT + Y+L++ F + YP P+ F P HP++Y +G +CL
Sbjct: 42 NLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLD 101
Query: 433 LLDEEKDWRPAITIKQILLGIQDLLMS 513
+L + W PA+T+ + + I +L S
Sbjct: 102 ILYD--SWSPAMTVNSVCISILSMLSS 126
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLS 432
NL W + G GT + Y+L++ F + YP P+ F+ P HP++Y +G +CL
Sbjct: 42 NLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLD 101
Query: 433 LLDEEKDWRPAITIKQILLGIQDLLMSLT*KIQRK 537
+L + W PA+ + I L I +L S + K + K
Sbjct: 102 VLYD--SWSPAMRLSSICLSILSMLSSSSVKQKPK 134
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 58.8 bits (136), Expect = 4e-09
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Frame = +1
Query: 205 PSLWFCREAYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP 384
P + F R AYE SR M+L+ I G +GTP+ GL+ + F D YPS+PP +
Sbjct: 349 PEMIFVR-AYE-SR--MDLL--RAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHS 402
Query: 385 P--LFHPNVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDLLMS 513
+PN+Y G VCLSLL ++ + W P T+ Q+L+ IQ L+++
Sbjct: 403 GGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLD---- 441
I G +GTP+ GL+ + F D YPS PPK + +PN+Y G VCLSL+
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTG 700
Query: 442 -EEKDWRP-AITIKQILLGIQDLLMS 513
+ + W P T+ Q+L+ IQ L+++
Sbjct: 701 KKREKWLPKESTMLQLLVSIQALILN 726
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 438
I G +GTP+ GL+ + F D YPS PP + +PN+Y G VCLSLL
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG 366
Query: 439 DEEKDWRP-AITIKQILLGIQDLLMS 513
+ W P T+ Q+L+ IQ L+++
Sbjct: 367 SAREKWLPNESTMLQLLVSIQALILN 392
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSL 435
I G +GTP+ GL+ + F D YPS PP + +PN+Y G V +S+
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
+++ W + G +GTP+ GG Y ++ F +YP PP P + +CLS+
Sbjct: 33 DILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSM 90
Query: 436 LD-EEKDWRPAITIKQILLGIQDLLM 510
D + W P ++ IL G+ +M
Sbjct: 91 SDFHPESWNPMWSVSSILTGLLSFMM 116
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
+++ W + G +GTP+ GG Y ++ F +YP PP P + +CLS+
Sbjct: 33 DILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICLSM 90
Query: 436 LD-EEKDWRPAITIKQILLGIQDLLM 510
D + W P ++ IL G+ +M
Sbjct: 91 SDFHPESWNPMWSVSSILTGLLSFMM 116
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 51.2 bits (117), Expect = 7e-07
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Frame = +1
Query: 229 AYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPN 402
AYE+ M+L+ I G GTP++ GL+ DYPS PP + +PN
Sbjct: 874 AYEDR---MDLL--RAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPN 928
Query: 403 VYPSGTVCLSLLDE-----EKDWRP-AITIKQILLGIQDLLMS 513
+Y G VCLSLL+ + W P + +I Q+L+ +Q L+++
Sbjct: 929 LYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLN 971
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
+LM +E I +G + G + + YP PK K + ++HPN+ G VCL++
Sbjct: 59 DLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNI 117
Query: 436 LDEEKDWRPAITIKQILLGI 495
L E DW+P + I ++ G+
Sbjct: 118 LRE--DWKPVLNINTVIYGL 135
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 286 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 462
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 463 AITIKQI 483
+ +
Sbjct: 96 MFDLVNV 102
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSL 435
+ +W I G T +EG +++L++ DYP SPP +F+ + V P +G V S
Sbjct: 44 MQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSH 103
Query: 436 LDEEKDWRPAITIKQILLGIQDLLMS 513
+WR T++ +L+ ++ +MS
Sbjct: 104 FPMLSNWRREFTMEDLLIQLKKEMMS 129
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 286 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 462
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 463 AITIKQI 483
+ +
Sbjct: 96 MFDLVNV 102
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Frame = +1
Query: 277 AIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP--PLFHPNVYPSGTVCLSLLDE-- 444
A+ G GTP+ GL+ ++ YP PP + +PN+Y SG VCLSLL+
Sbjct: 697 ALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWS 756
Query: 445 ---EKDWRP-AITIKQILLGIQDLLMS 513
+ W + +I Q+LL Q L+++
Sbjct: 757 GSGTEVWNAGSSSILQLLLSFQALVLN 783
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSL 435
+ +W I G T +EG +++L++ +YP SPP +F+ + V P +G V SL
Sbjct: 44 MQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSL 103
Query: 436 LDEEKDWRPAITIKQILLGIQDLLMS 513
+WR T++ IL+ ++ +M+
Sbjct: 104 FPMLTNWRREYTMEDILVKLKKEMMT 129
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N+ W+ AI G T +EGG+Y R+ DYP PP P + + +CLS+
Sbjct: 39 NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSI 96
Query: 436 LD-EEKDWRPAITIKQILLGI 495
+ + W+P+ +++ L+ +
Sbjct: 97 SNYHPEHWQPSWSVRTALVAL 117
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 286 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 462
G + ++GG++K+++ + YP P F ++HPNV SG VCL ++++ W P
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ--TWSP 95
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 259 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSL 435
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 45 MRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKK 104
Query: 436 LDEEKDWRPAITIKQIL 486
+W+ T++ IL
Sbjct: 105 FGVLANWQRQYTMEDIL 121
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSL 435
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 46 MRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKK 105
Query: 436 LDEEKDWRPAITIKQILLGIQ 498
+W+ T++ IL+ ++
Sbjct: 106 FGLLANWQREYTMEDILVQLK 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 259 LMTWECAIPGKKG-TPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 432
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 45 MRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSK 104
Query: 433 LLDEEKDWRPAITIKQIL 486
+W+ T++ IL
Sbjct: 105 KFGVLANWQRQYTMEDIL 122
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 259 LMTWECAIPGKKG-TPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 432
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 46 MRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPK 105
Query: 433 LLDEEKDWRPAITIKQILLGIQ 498
+W+ T++ IL+ ++
Sbjct: 106 KFGLLANWQREYTMEDILVQLK 127
>At3g09300.1 68416.m01104 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profile PF01237: Oxysterol-binding protein
Length = 458
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 462 SNHNKANFVGYSRSSHEPNVKDPAQAEAYTIYCQNRLE 575
+N+N NF+ S H P A+ E +T C ++L+
Sbjct: 161 ANYNGVNFISEQVSHHPPMSAGHAENEHFTYDCTSKLK 198
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,409,045
Number of Sequences: 28952
Number of extensions: 359965
Number of successful extensions: 914
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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