Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00452
(675 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 149 8e-35
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 149 8e-35
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 135 8e-31
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 131 1e-29
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 117 3e-25
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 116 4e-25
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 115 1e-24
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 98 2e-19
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 97 3e-19
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 79 7e-14
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 75 1e-12
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 75 1e-12
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 75 2e-12
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 71 3e-11
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 70 6e-11
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 63 7e-09
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 53 7e-06
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 53 7e-06
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 51 3e-05
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 46 8e-04
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 44 0.004
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 42 0.010
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 42 0.018
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 40 0.073
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 40 0.073
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 37 0.39
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 37 0.39
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 37 0.51
UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed C... 35 2.1
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 34 2.7
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 34 3.6
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 33 4.8
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 33 6.3
UniRef50_A1YJC5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.4
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 33 8.4
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 149 bits (360), Expect = 8e-35
Identities = 65/79 (82%), Positives = 71/79 (89%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 199 DTGNFSWGSECSTRKTRIM 255
D GNFSWGSEC TRKTRI+
Sbjct: 61 DVGNFSWGSECCTRKTRII 79
Score = 125 bits (301), Expect = 1e-27
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINK 434
DVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NK
Sbjct: 80 DVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNK 139
Query: 435 KRSQKTARKY 464
KRS+K +KY
Sbjct: 140 KRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 149 bits (360), Expect = 8e-35
Identities = 65/79 (82%), Positives = 71/79 (89%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 199 DTGNFSWGSECSTRKTRIM 255
D GNFSWGSEC TRKTRI+
Sbjct: 61 DVGNFSWGSECCTRKTRII 79
Score = 135 bits (327), Expect = 8e-31
Identities = 62/90 (68%), Positives = 74/90 (82%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINK 434
DVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NK
Sbjct: 80 DVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNK 139
Query: 435 KRSQKTARKYLARQRLAKVEGALEDNSTRG 524
KRS+K +KY R++ AK+ LE+ +G
Sbjct: 140 KRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 84.2 bits (199), Expect = 3e-15
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 640
QF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 165 QFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 135 bits (327), Expect = 8e-31
Identities = 62/90 (68%), Positives = 74/90 (82%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINK 434
DVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NK
Sbjct: 60 DVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNK 119
Query: 435 KRSQKTARKYLARQRLAKVEGALEDNSTRG 524
KRS+K +KY R++ AK+ LE+ +G
Sbjct: 120 KRSKKIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTK 180
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG T+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
Score = 84.2 bits (199), Expect = 3e-15
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 640
QF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 145 QFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 131 bits (317), Expect = 1e-29
Identities = 62/92 (67%), Positives = 73/92 (79%), Gaps = 2/92 (2%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--II 428
DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++
Sbjct: 80 DVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVL 139
Query: 429 NKKRSQKTARKYLARQRLAKVEGALEDNSTRG 524
KKRS+K +KYL RQ+ KVE ALED T G
Sbjct: 140 TKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 128 bits (308), Expect = 2e-28
Identities = 59/78 (75%), Positives = 66/78 (84%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 199 DTGNFSWGSECSTRKTRI 252
+TGNF+W SE RKTRI
Sbjct: 61 ETGNFAWASEGVARKTRI 78
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/42 (80%), Positives = 41/42 (97%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 634
QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 167 QFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 117 bits (281), Expect = 3e-25
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGISRD HKRR TGG+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRL
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRL 60
Query: 199 DTGNFSWGSECSTRKTRIM 255
D+GNFSWGS+ TRKTR+M
Sbjct: 61 DSGNFSWGSQNVTRKTRVM 79
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 386
DVVYNAS+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG+
Sbjct: 80 DVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 634
QF +GRLLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 145 QFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 116 bits (280), Expect = 4e-25
Identities = 56/80 (70%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALR 195
MGISRD HKRRATGGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 196 LDTGNFSWGSECSTRKTRIM 255
LDTGN+SWGSE TRKTRI+
Sbjct: 61 LDTGNYSWGSEAVTRKTRIL 80
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/88 (48%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK---GAKLTEAEEAI 425
DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK AK AE
Sbjct: 81 DVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQE 140
Query: 426 INKKRSQKTARKYLARQRLAKVEGALED 509
+ + ++ R+ + EG D
Sbjct: 141 VEAAAEETKKSNHVTRKLEKRKEGRTLD 168
Score = 80.6 bits (190), Expect = 3e-14
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 640
QF +GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 174 QFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 115 bits (276), Expect = 1e-24
Identities = 52/81 (64%), Positives = 64/81 (79%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGISRD HKR ATG KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL
Sbjct: 1 MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRL 60
Query: 199 DTGNFSWGSECSTRKTRIMML 261
++GNFSWGSE RK R++++
Sbjct: 61 ESGNFSWGSEGIARKVRVIVV 81
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +2
Query: 506 RQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 625
+QF GRL A V+SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 101 KQFEAGRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGI+RD HKRRATGGK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRL 60
Query: 199 DTGNFSWGSECSTRKTRIM 255
+ GNFSW S+ T+ T+I+
Sbjct: 61 ENGNFSWASQSITKGTKIL 79
Score = 64.5 bits (150), Expect = 2e-09
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +2
Query: 512 FHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 634
F +GR+LAC++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 196 FQSGRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINK 434
+VVYNAS+N+ VRT TLVK AI+ +D PFR W+ Y + K E+ K
Sbjct: 80 NVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEK 139
Query: 435 K----RSQKTARKYLARQRLAKVEGALEDNS 515
K + ++ K +A Q++A+ + AL + S
Sbjct: 140 KVVVPKEEENKEKTIA-QQIAETQVALMNPS 169
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/79 (58%), Positives = 55/79 (69%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGI R HKR+ TGGK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRL
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRL 60
Query: 199 DTGNFSWGSECSTRKTRIM 255
DTGNF+W SE + R++
Sbjct: 61 DTGNFAWASEAIAHRVRLL 79
Score = 77.4 bits (182), Expect = 3e-13
Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 13/103 (12%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE---- 419
DVVYNA++NELVRTKTLVKN IV VDA PF++WY HY + L KK K A E
Sbjct: 80 DVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGR 139
Query: 420 ----AIINK----KRSQKTARKYLARQRLAKVEGALEDNSTRG 524
A +K K S K R++ R+R +VE A+ D G
Sbjct: 140 KSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREG 182
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 634
Q GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 178 QLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 79.4 bits (187), Expect = 7e-14
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 240
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 241 KTRIM 255
KTRI+
Sbjct: 173 KTRIL 177
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 255 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 419
DVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 178 DVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +2
Query: 533 ACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 640
AC+ASRPGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRL---------GPQRIHSVRSRGG 171
MGI+ D +KR TG + KKRKY LGR ANT+L Q+I ++R RGG
Sbjct: 1 MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGG 60
Query: 172 NTKYRALRLDTGNFSWGSECSTRKTRIMMLCIMHLTMNWCVQ 297
N K RALRL G+F+WGS + K RI+ + + + T N V+
Sbjct: 61 NIKRRALRLSHGSFAWGSADISHKARILQV-VYNSTSNELVR 101
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 631
Q +LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 134 QIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +3
Query: 258 VVYNASNNELVRTKTLVKNAIVVVDATPFR 347
VVYN+++NELVRT TLVK +V +D+ PF+
Sbjct: 90 VVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 74.5 bits (175), Expect = 2e-12
Identities = 30/46 (65%), Positives = 41/46 (89%)
Frame = +2
Query: 503 RRQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 640
+ +F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 75 KEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 49.6 bits (113), Expect = 7e-05
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Frame = +3
Query: 309 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 467
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 468 ARQRL--AKVEGALEDNSTRG 524
RQ L A VE +L++ G
Sbjct: 61 TRQALPQANVEESLKEEFVTG 81
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGI+R+ HKR++TGG ++ RKKR + GR +NT++G + + +R RGG K RAL L
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFL 60
Query: 199 DTGNFSWGSECSTRKTRIM 255
GNFS+ S T K +I+
Sbjct: 61 SYGNFSFVSIQRTFKAKIL 79
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +2
Query: 509 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 631
Q +G++LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 138 QILSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
Score = 34.3 bits (75), Expect = 2.7
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 258 VVYNASNNELVRTKTLVKNAIVVVD 332
V +N S+NELVRT TL K +IV +D
Sbjct: 81 VAFNESSNELVRTNTLTKGSIVYLD 105
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/93 (38%), Positives = 55/93 (59%)
Frame = +1
Query: 19 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 198
MGI+ HKRR TG K RKKR G ++T++G +++ VR RGGN KY+ALRL
Sbjct: 1 MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRL 60
Query: 199 DTGNFSWGSECSTRKTRIMMLCIMHLTMNWCVQ 297
D G+F + + R +++ + + H + N V+
Sbjct: 61 DMGHFKFITTGKFRMAKLLQV-VYHPSSNELVR 92
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 512 FHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 631
F G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 128 FEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
Score = 40.7 bits (91), Expect = 0.032
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 258 VVYNASNNELVRTKTLVKNAIVVVDATPFR 347
VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 81 VVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 228
R+ +GGK P KR+YELGR TRLG + + +RS GGN+K+ LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 229 CSTRKTRI 252
+TRK +I
Sbjct: 70 KTTRKVKI 77
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 52.8 bits (121), Expect = 7e-06
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 222
K++ TGGK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62
Query: 223 SECSTRKTRIMMLCIMHLTMNWCVQRPLSR 312
+ ++ ++I+ + + +R LS+
Sbjct: 63 TMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 228
R+ +GG+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 229 CSTRKTRI 252
T+KT+I
Sbjct: 69 GETKKTKI 76
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 225
++ATGG RKKR++ELGR T+LG + V R+ GGNTK +T N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 226 ECSTRKTRIM 255
E +K +I+
Sbjct: 70 EKKIKKAKII 79
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +1
Query: 40 WHKR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTK 180
WH R + TGG+ P RKKRK+E+G P T +G +R + R GGN K
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK 54
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 228
R+ATGG+ R KRK+ELGR +G Q++ + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 229 CSTRKTRI 252
T+K ++
Sbjct: 69 GKTQKVKM 76
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 42.3 bits (95), Expect = 0.010
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGS 225
R+ TGG + R KRKYE+G P T L + I R+ GGN K R T N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 226 ECSTRKTRIM 255
+ +K +I+
Sbjct: 70 TNTAKKVKIL 79
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 41.5 bits (93), Expect = 0.018
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGS 225
++ +GG+ RKKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68
Query: 226 ECSTRKTRIM 255
RK RI+
Sbjct: 69 SGKGRKVRII 78
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 39.5 bits (88), Expect = 0.073
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +3
Query: 282 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 461
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 462 YLARQRLAKVEGALEDNSTRG 524
RQ+ K++ +E+ G
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSG 99
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 39.5 bits (88), Expect = 0.073
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +1
Query: 19 MGISRDHWH-KRRATGGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKY 183
MGI + W K++ +GGKR K KRKY GRP T L + VR+RGG+ K
Sbjct: 1 MGIYQ--WRDKKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKI 58
Query: 184 RALRLDTGNFSWGSECSTRKTRIMML 261
+A ++ S RK RI+ +
Sbjct: 59 KAKKVAFAVVSNPKTGEARKARILRI 84
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 37.1 bits (82), Expect = 0.39
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 52 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFS 216
+ TGG+R P+R +RKYE+ R G Q + + RG TK +D N +
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA 66
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 37.1 bits (82), Expect = 0.39
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 46 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGN 210
+R +TG K KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYAN 64
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 36.7 bits (81), Expect = 0.51
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 55 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 165
A G +RAP K YE R AA TRL P + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed
CG2189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Deformed CG2189-PA - Apis mellifera
Length = 284
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 35 ITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLSVSTPFVHVVEILS 181
+TG+ EGPP G + GS+S P +P + L VS P +H I S
Sbjct: 230 VTGMMEGPPGGGPLGHIASGSISPLAPATSPSATLQVSAP-IHPPPIKS 277
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 34.3 bits (75), Expect = 2.7
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 32 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLS 142
G S GP G + PYA + S S G+PL TPGSVLS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.9 bits (74), Expect = 3.6
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 443
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRA 189
R+ +G + + KR E GR A TR+G + + +RG TK RA
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRA 56
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 33.1 bits (72), Expect = 6.3
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 49 RRATGGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWG 222
++ +GGK+ +RK +K L G P +LG V R RGGN K R N
Sbjct: 13 KKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIP 72
Query: 223 SECSTRKTRIMML 261
E + K +I+ +
Sbjct: 73 KERKSVKAKIISI 85
>UniRef50_A1YJC5 Cluster: Putative uncharacterized protein; n=1;
Spodoptera frugiperda MNPV|Rep: Putative uncharacterized
protein - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 106
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 228 MFNSQNPYHDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK 392
+FN PY VV SNN+ ++ N +V + P++ +Y+ H T+ ++K
Sbjct: 25 IFNKNVPYVYVVKLDSNNDFQDIYKMIDNEVVEIKRPPYK-YYKVHLTINAAKEK 78
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 318 IVVVDATPFRQWYESHYTLPLGRKK 392
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 390 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG---ALEDNSTR 521
+G KL EAE+ ++ +++S+ A K L ++ + ++EG LE TR
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEGEKKLLEGEMTR 632
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 333 ATPFRQWYESHYTLPLGRKKGAKLTEAE 416
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,595,086
Number of Sequences: 1657284
Number of extensions: 13354217
Number of successful extensions: 38364
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38345
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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